Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Gm44430-201ENSMUST00000203376 995 ntBASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC051142Q3V0M8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BC051142Q3V0M8 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms