Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl5Q3UTQ8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Gm27742-201ENSMUST00000184667 60 ntBASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl5Q3UTQ8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl5Q3UTQ8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl5Q3UTQ8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Gm33142-201ENSMUST00000193913 867 ntBASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Cdkl5Q3UTQ8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkl5Q3UTQ8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.52■□□□□ 0.55
Cdkl5Q3UTQ8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkl5Q3UTQ8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkl5Q3UTQ8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkl5Q3UTQ8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms