Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Gm26833-201ENSMUST00000180899 440 ntBASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks1brtQ3UNC9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks1brtQ3UNC9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.55
Cks1brtQ3UNC9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Cks1brtQ3UNC9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cks1brtQ3UNC9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Gm43173-201ENSMUST00000202246 593 ntBASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 App-207ENSMUST00000227737 2827 ntBASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks1brtQ3UNC9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cks1brtQ3UNC9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms