Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Gm13436-201ENSMUST00000120418 567 ntBASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhej1Q3KNJ2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nhej1Q3KNJ2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Nhej1Q3KNJ2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nhej1Q3KNJ2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Nhej1Q3KNJ2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nhej1Q3KNJ2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nhej1Q3KNJ2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhej1Q3KNJ2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhej1Q3KNJ2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.06■□□□□ 0.32
Nhej1Q3KNJ2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms