Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna5Q2MKA5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna5Q2MKA5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna5Q2MKA5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna5Q2MKA5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Gm20949-201ENSMUST00000206478 952 ntBASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.97■□□□□ 0.63
Chrna5Q2MKA5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Gm15427-201ENSMUST00000117288 531 ntBASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Gm18489-201ENSMUST00000172565 551 ntBASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna5Q2MKA5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Gm11745-201ENSMUST00000121669 448 ntBASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna5Q2MKA5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Gm5186-201ENSMUST00000218781 920 ntBASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Chrna5Q2MKA5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chrna5Q2MKA5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chrna5Q2MKA5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Chrna5Q2MKA5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms