Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.28□□□□□ -0.12
Chd8Q09XV5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.28□□□□□ -0.12
Chd8Q09XV5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Gm29667-201ENSMUST00000190817 490 ntBASIC14.28□□□□□ -0.12
Chd8Q09XV5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd8Q09XV5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Chd8Q09XV5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd8Q09XV5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chd8Q09XV5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Chd8Q09XV5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd8Q09XV5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Gm13392-201ENSMUST00000117708 150 ntBASIC14.27□□□□□ -0.13
Chd8Q09XV5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Gm18737-201ENSMUST00000173594 937 ntBASIC14.27□□□□□ -0.13
Chd8Q09XV5 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.27□□□□□ -0.13
Chd8Q09XV5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Gm2810-201ENSMUST00000118681 990 ntBASIC14.27□□□□□ -0.13
Chd8Q09XV5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.27□□□□□ -0.13
Chd8Q09XV5 Gm18489-201ENSMUST00000172565 551 ntBASIC14.27□□□□□ -0.13
Chd8Q09XV5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.27□□□□□ -0.13
Chd8Q09XV5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd8Q09XV5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd8Q09XV5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.25□□□□□ -0.13
Chd8Q09XV5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Gm13226-201ENSMUST00000117838 404 ntBASIC14.25□□□□□ -0.13
Chd8Q09XV5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.25□□□□□ -0.13
Chd8Q09XV5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd8Q09XV5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.24□□□□□ -0.13
Chd8Q09XV5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.24□□□□□ -0.13
Chd8Q09XV5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.24□□□□□ -0.13
Chd8Q09XV5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.24□□□□□ -0.13
Chd8Q09XV5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Gm9002-201ENSMUST00000178437 499 ntBASIC14.24□□□□□ -0.13
Chd8Q09XV5 Gm28630-201ENSMUST00000187806 498 ntBASIC14.24□□□□□ -0.13
Chd8Q09XV5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd8Q09XV5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms