Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Mir6404-201ENSMUST00000183699 94 ntBASIC11.72□□□□□ -0.53
Hspg2Q05793 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.72□□□□□ -0.53
Hspg2Q05793 Gm25857-201ENSMUST00000082788 129 ntBASIC11.72□□□□□ -0.53
Hspg2Q05793 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hspg2Q05793 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.72□□□□□ -0.53
Hspg2Q05793 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.72□□□□□ -0.53
Hspg2Q05793 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hspg2Q05793 Gm27306-201ENSMUST00000183970 107 ntBASIC11.72□□□□□ -0.53
Hspg2Q05793 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.72□□□□□ -0.53
Hspg2Q05793 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.71□□□□□ -0.53
Hspg2Q05793 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.71□□□□□ -0.53
Hspg2Q05793 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Gm6912-201ENSMUST00000117218 544 ntBASIC11.71□□□□□ -0.53
Hspg2Q05793 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hspg2Q05793 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hspg2Q05793 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Hspg2Q05793 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.71□□□□□ -0.53
Hspg2Q05793 Mir1895-201ENSMUST00000122615 79 ntBASIC11.71□□□□□ -0.53
Hspg2Q05793 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hspg2Q05793 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hspg2Q05793 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hspg2Q05793 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hspg2Q05793 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hspg2Q05793 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.71□□□□□ -0.54
Hspg2Q05793 Gm15358-201ENSMUST00000119249 520 ntBASIC11.71□□□□□ -0.54
Hspg2Q05793 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.71□□□□□ -0.54
Hspg2Q05793 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hspg2Q05793 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.71□□□□□ -0.54
Hspg2Q05793 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.71□□□□□ -0.54
Hspg2Q05793 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hspg2Q05793 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hspg2Q05793 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.7□□□□□ -0.54
Hspg2Q05793 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Hspg2Q05793 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Hspg2Q05793 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.7□□□□□ -0.54
Hspg2Q05793 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.7□□□□□ -0.54
Hspg2Q05793 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hspg2Q05793 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Hspg2Q05793 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.69□□□□□ -0.54
Hspg2Q05793 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.69□□□□□ -0.54
Hspg2Q05793 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.69□□□□□ -0.54
Hspg2Q05793 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.69□□□□□ -0.54
Hspg2Q05793 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.69□□□□□ -0.54
Hspg2Q05793 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hspg2Q05793 Gm15427-201ENSMUST00000117288 531 ntBASIC11.69□□□□□ -0.54
Hspg2Q05793 Gm15653-201ENSMUST00000119247 907 ntBASIC11.69□□□□□ -0.54
Hspg2Q05793 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.69□□□□□ -0.54
Hspg2Q05793 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms