Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.41■□□□□ 0.38
Trim43cP86449 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim43cP86449 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Trim43cP86449 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Trim43cP86449 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Trim43cP86449 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim43cP86449 Ank2-226ENSMUST00000189368 339 ntBASIC17.41■□□□□ 0.38
Trim43cP86449 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim43cP86449 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim43cP86449 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim43cP86449 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43cP86449 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim43cP86449 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim43cP86449 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim43cP86449 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.4■□□□□ 0.38
Trim43cP86449 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim43cP86449 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim43cP86449 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim43cP86449 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim43cP86449 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Trim43cP86449 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim43cP86449 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim43cP86449 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43cP86449 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.39■□□□□ 0.38
Trim43cP86449 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim43cP86449 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim43cP86449 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim43cP86449 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim43cP86449 Gm25406-201ENSMUST00000157599 105 ntBASIC17.39■□□□□ 0.37
Trim43cP86449 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.39■□□□□ 0.37
Trim43cP86449 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Trim43cP86449 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim43cP86449 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim43cP86449 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim43cP86449 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43cP86449 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Trim43cP86449 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43cP86449 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43cP86449 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43cP86449 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43cP86449 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim43cP86449 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim43cP86449 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.38■□□□□ 0.37
Trim43cP86449 Gm15372-201ENSMUST00000120729 834 ntBASIC17.38■□□□□ 0.37
Trim43cP86449 Gm44454-201ENSMUST00000198541 138 ntBASIC17.38■□□□□ 0.37
Trim43cP86449 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim43cP86449 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43cP86449 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43cP86449 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim43cP86449 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.37■□□□□ 0.37
Trim43cP86449 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Rprl3-201ENSMUST00000157400 290 ntBASIC17.37■□□□□ 0.37
Trim43cP86449 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim43cP86449 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms