Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.2■□□□□ 0.18
ThraP63058 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.2■□□□□ 0.18
ThraP63058 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.2■□□□□ 0.18
ThraP63058 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ThraP63058 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ThraP63058 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
ThraP63058 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ThraP63058 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ThraP63058 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.19■□□□□ 0.18
ThraP63058 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.19■□□□□ 0.18
ThraP63058 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ThraP63058 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ThraP63058 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
ThraP63058 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ThraP63058 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.19■□□□□ 0.18
ThraP63058 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.19■□□□□ 0.18
ThraP63058 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ThraP63058 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ThraP63058 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
ThraP63058 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.18■□□□□ 0.18
ThraP63058 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.18■□□□□ 0.18
ThraP63058 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ThraP63058 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.18■□□□□ 0.18
ThraP63058 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
ThraP63058 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ThraP63058 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ThraP63058 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ThraP63058 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ThraP63058 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ThraP63058 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.18■□□□□ 0.18
ThraP63058 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.17■□□□□ 0.18
ThraP63058 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms