Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm18622-201ENSMUST00000219361 595 ntBASIC16.37■□□□□ 0.21
Ybx1P62960 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Dancr-204ENSMUST00000132389 2347 ntBASIC16.37■□□□□ 0.21
Ybx1P62960 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ybx1P62960 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ybx1P62960 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.36■□□□□ 0.21
Ybx1P62960 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ybx1P62960 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.36■□□□□ 0.21
Ybx1P62960 Gm10175-201ENSMUST00000086013 645 ntBASIC16.36■□□□□ 0.21
Ybx1P62960 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ybx1P62960 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ybx1P62960 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.35■□□□□ 0.21
Ybx1P62960 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.35■□□□□ 0.21
Ybx1P62960 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.35■□□□□ 0.21
Ybx1P62960 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ybx1P62960 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.34■□□□□ 0.21
Ybx1P62960 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.34■□□□□ 0.21
Ybx1P62960 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ybx1P62960 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.34■□□□□ 0.21
Ybx1P62960 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ybx1P62960 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.34■□□□□ 0.21
Ybx1P62960 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ybx1P62960 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.34■□□□□ 0.21
Ybx1P62960 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ybx1P62960 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ybx1P62960 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ybx1P62960 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.33■□□□□ 0.21
Ybx1P62960 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ybx1P62960 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ybx1P62960 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Ybx1P62960 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ybx1P62960 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ybx1P62960 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.33■□□□□ 0.2
Ybx1P62960 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.33■□□□□ 0.2
Ybx1P62960 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms