Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Lmo4P61969 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lmo4P61969 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Lmo4P61969 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.91□□□□□ -0.34
Lmo4P61969 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.91□□□□□ -0.34
Lmo4P61969 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.91□□□□□ -0.34
Lmo4P61969 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.91□□□□□ -0.34
Lmo4P61969 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lmo4P61969 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
Lmo4P61969 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Lmo4P61969 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.91□□□□□ -0.34
Lmo4P61969 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lmo4P61969 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Lmo4P61969 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lmo4P61969 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lmo4P61969 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lmo4P61969 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lmo4P61969 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lmo4P61969 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.9□□□□□ -0.34
Lmo4P61969 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.9□□□□□ -0.34
Lmo4P61969 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.9□□□□□ -0.34
Lmo4P61969 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.9□□□□□ -0.34
Lmo4P61969 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.9□□□□□ -0.34
Lmo4P61969 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.9□□□□□ -0.34
Lmo4P61969 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.9□□□□□ -0.34
Lmo4P61969 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lmo4P61969 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lmo4P61969 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lmo4P61969 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lmo4P61969 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lmo4P61969 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Lmo4P61969 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Lmo4P61969 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lmo4P61969 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lmo4P61969 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.89□□□□□ -0.35
Lmo4P61969 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.89□□□□□ -0.35
Lmo4P61969 Gm37153-201ENSMUST00000193637 231 ntBASIC12.89□□□□□ -0.35
Lmo4P61969 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.89□□□□□ -0.35
Lmo4P61969 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Lmo4P61969 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms