Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.18■□□□□ 0.82
Msh6P54276 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Msh6P54276 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Gm27300-201ENSMUST00000184085 97 ntBASIC20.18■□□□□ 0.82
Msh6P54276 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.18■□□□□ 0.82
Msh6P54276 Gm27335-201ENSMUST00000184758 97 ntBASIC20.18■□□□□ 0.82
Msh6P54276 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.18■□□□□ 0.82
Msh6P54276 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Msh6P54276 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Msh6P54276 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Msh6P54276 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Msh6P54276 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Msh6P54276 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Msh6P54276 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Msh6P54276 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.17■□□□□ 0.82
Msh6P54276 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Msh6P54276 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Msh6P54276 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Msh6P54276 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Msh6P54276 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.16■□□□□ 0.82
Msh6P54276 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.16■□□□□ 0.82
Msh6P54276 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Msh6P54276 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.16■□□□□ 0.82
Msh6P54276 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Msh6P54276 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Msh6P54276 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Msh6P54276 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Msh6P54276 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.15■□□□□ 0.82
Msh6P54276 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Msh6P54276 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.15■□□□□ 0.82
Msh6P54276 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.15■□□□□ 0.82
Msh6P54276 Gm6257-201ENSMUST00000163864 910 ntBASIC20.15■□□□□ 0.82
Msh6P54276 Gm37153-201ENSMUST00000193637 231 ntBASIC20.15■□□□□ 0.82
Msh6P54276 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Gm8396-201ENSMUST00000057361 823 ntBASIC20.15■□□□□ 0.82
Msh6P54276 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Msh6P54276 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Msh6P54276 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Msh6P54276 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Msh6P54276 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.14■□□□□ 0.82
Msh6P54276 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Msh6P54276 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Msh6P54276 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Msh6P54276 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
Msh6P54276 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Msh6P54276 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.14■□□□□ 0.81
Msh6P54276 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.14■□□□□ 0.81
Msh6P54276 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.14■□□□□ 0.81
Msh6P54276 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms