Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.84■□□□□ 0.13
Pdx1P52946 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.84■□□□□ 0.13
Pdx1P52946 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.84■□□□□ 0.13
Pdx1P52946 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Gm10819-201ENSMUST00000099988 561 ntBASIC15.84■□□□□ 0.13
Pdx1P52946 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Pdx1P52946 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pdx1P52946 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pdx1P52946 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Pdx1P52946 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdx1P52946 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.83■□□□□ 0.13
Pdx1P52946 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pdx1P52946 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pdx1P52946 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.83■□□□□ 0.12
Pdx1P52946 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.83■□□□□ 0.12
Pdx1P52946 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdx1P52946 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.82■□□□□ 0.12
Pdx1P52946 Rprl3-201ENSMUST00000157400 290 ntBASIC15.82■□□□□ 0.12
Pdx1P52946 Mir6404-201ENSMUST00000183699 94 ntBASIC15.82■□□□□ 0.12
Pdx1P52946 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.82■□□□□ 0.12
Pdx1P52946 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.82■□□□□ 0.12
Pdx1P52946 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdx1P52946 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pdx1P52946 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.81■□□□□ 0.12
Pdx1P52946 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.81■□□□□ 0.12
Pdx1P52946 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Pdx1P52946 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Pdx1P52946 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pdx1P52946 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Pdx1P52946 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.81■□□□□ 0.12
Pdx1P52946 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.81■□□□□ 0.12
Pdx1P52946 Gm44454-201ENSMUST00000198541 138 ntBASIC15.81■□□□□ 0.12
Pdx1P52946 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.81■□□□□ 0.12
Pdx1P52946 Gm18669-201ENSMUST00000216049 778 ntBASIC15.81■□□□□ 0.12
Pdx1P52946 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pdx1P52946 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdx1P52946 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pdx1P52946 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Pdx1P52946 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.8■□□□□ 0.12
Pdx1P52946 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pdx1P52946 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdx1P52946 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdx1P52946 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms