Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.27■□□□□ 0.2
Vps4bP46467 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps4bP46467 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps4bP46467 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps4bP46467 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps4bP46467 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vps4bP46467 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.26■□□□□ 0.19
Vps4bP46467 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.26■□□□□ 0.19
Vps4bP46467 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.26■□□□□ 0.19
Vps4bP46467 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Vps4bP46467 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.26■□□□□ 0.19
Vps4bP46467 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4bP46467 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps4bP46467 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.25■□□□□ 0.19
Vps4bP46467 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps4bP46467 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Vps4bP46467 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps4bP46467 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Gm21559-201ENSMUST00000220638 855 ntBASIC16.25■□□□□ 0.19
Vps4bP46467 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Gm8587-201ENSMUST00000076538 843 ntBASIC16.25■□□□□ 0.19
Vps4bP46467 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Vps4bP46467 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.25■□□□□ 0.19
Vps4bP46467 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4bP46467 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Vps4bP46467 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps4bP46467 Gm37722-201ENSMUST00000193757 208 ntBASIC16.24■□□□□ 0.19
Vps4bP46467 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Vps4bP46467 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps4bP46467 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4bP46467 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Vps4bP46467 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Vps4bP46467 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.23■□□□□ 0.19
Vps4bP46467 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Vps4bP46467 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Gm11355-201ENSMUST00000121120 306 ntBASIC16.23■□□□□ 0.19
Vps4bP46467 Gm18101-201ENSMUST00000215769 548 ntBASIC16.23■□□□□ 0.19
Vps4bP46467 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.23■□□□□ 0.19
Vps4bP46467 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.23■□□□□ 0.19
Vps4bP46467 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps4bP46467 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps4bP46467 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms