Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Gm4459-201ENSMUST00000118750 468 ntBASIC15.11■□□□□ 0.01
Nkx2-6P43688 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.11■□□□□ 0.01
Nkx2-6P43688 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.11■□□□□ 0.01
Nkx2-6P43688 Gm6089-201ENSMUST00000197666 938 ntBASIC15.11■□□□□ 0.01
Nkx2-6P43688 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.11■□□□□ 0.01
Nkx2-6P43688 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Gm11780-201ENSMUST00000136880 516 ntBASIC15.1■□□□□ 0.01
Nkx2-6P43688 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.1■□□□□ 0.01
Nkx2-6P43688 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 AV026068-213ENSMUST00000223675 1171 ntBASIC15.1■□□□□ 0.01
Nkx2-6P43688 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-6P43688 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Gm8097-201ENSMUST00000117903 829 ntBASIC15.09■□□□□ 0.01
Nkx2-6P43688 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.09■□□□□ 0.01
Nkx2-6P43688 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Psmb5-202ENSMUST00000227257 622 ntBASIC15.09■□□□□ 0.01
Nkx2-6P43688 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-6P43688 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Nkx2-6P43688 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-6P43688 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Nkx2-6P43688 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-6P43688 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-6P43688 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nkx2-6P43688 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.08■□□□□ 0
Nkx2-6P43688 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.08■□□□□ 0
Nkx2-6P43688 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.08■□□□□ 0
Nkx2-6P43688 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.08■□□□□ 0
Nkx2-6P43688 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-6P43688 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms