Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.98■□□□□ 0.31
HttP42859 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.98■□□□□ 0.31
HttP42859 Gm2810-201ENSMUST00000118681 990 ntBASIC16.98■□□□□ 0.31
HttP42859 Gm15321-201ENSMUST00000121290 288 ntBASIC16.98■□□□□ 0.31
HttP42859 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.98■□□□□ 0.31
HttP42859 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.98■□□□□ 0.31
HttP42859 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HttP42859 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HttP42859 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HttP42859 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HttP42859 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.97■□□□□ 0.31
HttP42859 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HttP42859 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.97■□□□□ 0.31
HttP42859 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.97■□□□□ 0.31
HttP42859 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Syt7-205ENSMUST00000224135 1557 ntBASIC16.97■□□□□ 0.31
HttP42859 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.97■□□□□ 0.31
HttP42859 Gm16215-201ENSMUST00000161990 637 ntBASIC16.97■□□□□ 0.31
HttP42859 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.97■□□□□ 0.31
HttP42859 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.97■□□□□ 0.31
HttP42859 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HttP42859 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Gm24694-201ENSMUST00000180054 110 ntBASIC16.96■□□□□ 0.31
HttP42859 Gm27663-201ENSMUST00000184839 110 ntBASIC16.96■□□□□ 0.31
HttP42859 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.96■□□□□ 0.31
HttP42859 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
HttP42859 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HttP42859 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HttP42859 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HttP42859 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HttP42859 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HttP42859 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.95■□□□□ 0.3
HttP42859 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.95■□□□□ 0.3
HttP42859 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HttP42859 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HttP42859 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HttP42859 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HttP42859 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.95■□□□□ 0.3
HttP42859 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HttP42859 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HttP42859 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HttP42859 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HttP42859 Gm6745-201ENSMUST00000199216 526 ntBASIC16.94■□□□□ 0.3
HttP42859 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.94■□□□□ 0.3
HttP42859 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HttP42859 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Mir1938-201ENSMUST00000158746 100 ntBASIC16.94■□□□□ 0.3
HttP42859 Gm25144-201ENSMUST00000179561 110 ntBASIC16.94■□□□□ 0.3
HttP42859 Gm25352-201ENSMUST00000179815 110 ntBASIC16.94■□□□□ 0.3
HttP42859 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.94■□□□□ 0.3
HttP42859 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.94■□□□□ 0.3
HttP42859 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HttP42859 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.94■□□□□ 0.3
HttP42859 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.94■□□□□ 0.3
HttP42859 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HttP42859 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.93■□□□□ 0.3
HttP42859 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HttP42859 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms