Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccl3P10855 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccl3P10855 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccl3P10855 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Ccl3P10855 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccl3P10855 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccl3P10855 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Ccl3P10855 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccl3P10855 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccl3P10855 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccl3P10855 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ccl3P10855 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Ccl3P10855 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl3P10855 Rarb-207ENSMUST00000225921 2756 ntBASIC14.11□□□□□ -0.15
Ccl3P10855 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccl3P10855 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccl3P10855 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Auts2-212ENSMUST00000178555 309 ntBASIC14.1□□□□□ -0.15
Ccl3P10855 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccl3P10855 Gm7787-201ENSMUST00000216858 688 ntBASIC14.1□□□□□ -0.15
Ccl3P10855 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccl3P10855 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccl3P10855 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl3P10855 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Ccl3P10855 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Ccl3P10855 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccl3P10855 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccl3P10855 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ccl3P10855 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.09□□□□□ -0.15
Ccl3P10855 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.09□□□□□ -0.15
Ccl3P10855 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccl3P10855 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.09□□□□□ -0.15
Ccl3P10855 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccl3P10855 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ccl3P10855 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccl3P10855 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl3P10855 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccl3P10855 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccl3P10855 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ccl3P10855 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.08□□□□□ -0.15
Ccl3P10855 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccl3P10855 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccl3P10855 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccl3P10855 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ccl3P10855 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccl3P10855 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccl3P10855 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccl3P10855 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms