Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ly6c1P0CW02 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.37□□□□□ -0.27
Ly6c1P0CW02 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ly6c1P0CW02 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ly6c1P0CW02 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ly6c1P0CW02 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ly6c1P0CW02 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ly6c1P0CW02 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.37□□□□□ -0.27
Ly6c1P0CW02 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.36□□□□□ -0.27
Ly6c1P0CW02 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ly6c1P0CW02 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Gm25406-201ENSMUST00000157599 105 ntBASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ly6c1P0CW02 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ly6c1P0CW02 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms