Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TnfP06804 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TnfP06804 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TnfP06804 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
TnfP06804 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TnfP06804 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TnfP06804 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TnfP06804 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TnfP06804 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TnfP06804 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.95■□□□□ 0.3
TnfP06804 Gm1401-201ENSMUST00000122048 772 ntBASIC16.95■□□□□ 0.3
TnfP06804 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.95■□□□□ 0.3
TnfP06804 Mir5126-201ENSMUST00000175513 77 ntBASIC16.95■□□□□ 0.3
TnfP06804 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TnfP06804 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TnfP06804 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TnfP06804 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.95■□□□□ 0.3
TnfP06804 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TnfP06804 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.95■□□□□ 0.3
TnfP06804 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.94■□□□□ 0.3
TnfP06804 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TnfP06804 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TnfP06804 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.94■□□□□ 0.3
TnfP06804 Gm6550-201ENSMUST00000187574 993 ntBASIC16.94■□□□□ 0.3
TnfP06804 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
TnfP06804 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TnfP06804 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.94■□□□□ 0.3
TnfP06804 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.94■□□□□ 0.3
TnfP06804 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TnfP06804 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TnfP06804 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TnfP06804 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.93■□□□□ 0.3
TnfP06804 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.93■□□□□ 0.3
TnfP06804 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TnfP06804 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.93■□□□□ 0.3
TnfP06804 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.93■□□□□ 0.3
TnfP06804 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
TnfP06804 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TnfP06804 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Gm15590-201ENSMUST00000078419 552 ntBASIC16.93■□□□□ 0.3
TnfP06804 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TnfP06804 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.92■□□□□ 0.3
TnfP06804 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TnfP06804 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TnfP06804 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.92■□□□□ 0.3
TnfP06804 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.92■□□□□ 0.3
TnfP06804 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.92■□□□□ 0.3
TnfP06804 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TnfP06804 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms