Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Apaf1O88879 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.78■□□□□ 0.92
Apaf1O88879 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Apaf1O88879 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.78■□□□□ 0.92
Apaf1O88879 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Gm8097-201ENSMUST00000117903 829 ntBASIC20.78■□□□□ 0.92
Apaf1O88879 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.78■□□□□ 0.92
Apaf1O88879 Rps4l-201ENSMUST00000071745 943 ntBASIC20.78■□□□□ 0.92
Apaf1O88879 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Apaf1O88879 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Apaf1O88879 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Apaf1O88879 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Apaf1O88879 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Apaf1O88879 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.77■□□□□ 0.92
Apaf1O88879 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Apaf1O88879 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Apaf1O88879 Gm13418-201ENSMUST00000119097 944 ntBASIC20.77■□□□□ 0.92
Apaf1O88879 Gm7862-201ENSMUST00000121461 292 ntBASIC20.77■□□□□ 0.92
Apaf1O88879 Gm12497-201ENSMUST00000138778 237 ntBASIC20.77■□□□□ 0.92
Apaf1O88879 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Apaf1O88879 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Apaf1O88879 Mzt1-203ENSMUST00000227948 952 ntBASIC20.77■□□□□ 0.92
Apaf1O88879 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Apaf1O88879 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.77■□□□□ 0.92
Apaf1O88879 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.77■□□□□ 0.92
Apaf1O88879 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Apaf1O88879 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.77■□□□□ 0.91
Apaf1O88879 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Apaf1O88879 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Apaf1O88879 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Apaf1O88879 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Apaf1O88879 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.76■□□□□ 0.91
Apaf1O88879 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm8825-201ENSMUST00000182565 998 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm4518-201ENSMUST00000182638 718 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.76■□□□□ 0.91
Apaf1O88879 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.76■□□□□ 0.91
Apaf1O88879 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.76■□□□□ 0.91
Apaf1O88879 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Apaf1O88879 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Apaf1O88879 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apaf1O88879 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Gm11780-201ENSMUST00000136880 516 ntBASIC20.75■□□□□ 0.91
Apaf1O88879 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Apaf1O88879 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.75■□□□□ 0.91
Apaf1O88879 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Apaf1O88879 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.75■□□□□ 0.91
Apaf1O88879 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.75■□□□□ 0.91
Apaf1O88879 Gm8655-201ENSMUST00000221159 852 ntBASIC20.75■□□□□ 0.91
Apaf1O88879 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apaf1O88879 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms