Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.35■□□□□ 0.05
Best1O88870 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.35■□□□□ 0.05
Best1O88870 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Gm15358-201ENSMUST00000119249 520 ntBASIC15.35■□□□□ 0.05
Best1O88870 Gm11764-201ENSMUST00000120221 623 ntBASIC15.35■□□□□ 0.05
Best1O88870 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.35■□□□□ 0.05
Best1O88870 Gm27646-201ENSMUST00000183989 110 ntBASIC15.35■□□□□ 0.05
Best1O88870 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Best1O88870 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Best1O88870 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.35■□□□□ 0.05
Best1O88870 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Best1O88870 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Best1O88870 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Best1O88870 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.34■□□□□ 0.05
Best1O88870 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Best1O88870 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Best1O88870 Gm1401-201ENSMUST00000122048 772 ntBASIC15.34■□□□□ 0.05
Best1O88870 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.34■□□□□ 0.05
Best1O88870 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.34■□□□□ 0.05
Best1O88870 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.34■□□□□ 0.05
Best1O88870 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Best1O88870 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.34■□□□□ 0.05
Best1O88870 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Best1O88870 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.33■□□□□ 0.04
Best1O88870 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.33■□□□□ 0.04
Best1O88870 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.33■□□□□ 0.04
Best1O88870 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.33■□□□□ 0.04
Best1O88870 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Best1O88870 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.32■□□□□ 0.04
Best1O88870 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.32■□□□□ 0.04
Best1O88870 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.32■□□□□ 0.04
Best1O88870 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Best1O88870 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Best1O88870 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Best1O88870 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Best1O88870 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Best1O88870 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Best1O88870 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Best1O88870 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Best1O88870 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Best1O88870 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms