Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.37□□□□□ -0.11
Cops3O88543 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.37□□□□□ -0.11
Cops3O88543 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cops3O88543 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cops3O88543 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cops3O88543 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 App-207ENSMUST00000227737 2827 ntBASIC14.36□□□□□ -0.11
Cops3O88543 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cops3O88543 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.36□□□□□ -0.11
Cops3O88543 Gm36967-201ENSMUST00000193814 266 ntBASIC14.36□□□□□ -0.11
Cops3O88543 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cops3O88543 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Gm5417-201ENSMUST00000079706 384 ntBASIC14.36□□□□□ -0.11
Cops3O88543 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cops3O88543 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.36□□□□□ -0.11
Cops3O88543 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.36□□□□□ -0.11
Cops3O88543 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops3O88543 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Cops3O88543 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.35□□□□□ -0.11
Cops3O88543 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Cops3O88543 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Gm10812-201ENSMUST00000099864 546 ntBASIC14.35□□□□□ -0.11
Cops3O88543 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops3O88543 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops3O88543 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.34□□□□□ -0.11
Cops3O88543 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cops3O88543 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.34□□□□□ -0.11
Cops3O88543 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cops3O88543 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cops3O88543 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms