Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.92□□□□□ -0.5
Rpl35aO55142 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpl35aO55142 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpl35aO55142 Gm27357-201ENSMUST00000183754 135 ntBASIC11.92□□□□□ -0.5
Rpl35aO55142 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.92□□□□□ -0.5
Rpl35aO55142 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl35aO55142 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpl35aO55142 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.91□□□□□ -0.5
Rpl35aO55142 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rpl35aO55142 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpl35aO55142 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpl35aO55142 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rpl35aO55142 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rpl35aO55142 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rpl35aO55142 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl35aO55142 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rpl35aO55142 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.9□□□□□ -0.5
Rpl35aO55142 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rpl35aO55142 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.9□□□□□ -0.5
Rpl35aO55142 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.9□□□□□ -0.5
Rpl35aO55142 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.9□□□□□ -0.5
Rpl35aO55142 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.9□□□□□ -0.5
Rpl35aO55142 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.9□□□□□ -0.5
Rpl35aO55142 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.9□□□□□ -0.5
Rpl35aO55142 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rpl35aO55142 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.9□□□□□ -0.5
Rpl35aO55142 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rpl35aO55142 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl35aO55142 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.9□□□□□ -0.5
Rpl35aO55142 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
Rpl35aO55142 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl35aO55142 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms