Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gm15590-201ENSMUST00000078419 552 ntBASIC18.35■□□□□ 0.53
Copb2O55029 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Copb2O55029 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Copb2O55029 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb2O55029 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Copb2O55029 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Copb2O55029 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Copb2O55029 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Copb2O55029 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Copb2O55029 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb2O55029 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Copb2O55029 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Copb2O55029 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.33■□□□□ 0.53
Copb2O55029 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Copb2O55029 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Copb2O55029 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.33■□□□□ 0.53
Copb2O55029 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Copb2O55029 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Copb2O55029 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.33■□□□□ 0.52
Copb2O55029 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.33■□□□□ 0.52
Copb2O55029 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Copb2O55029 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.33■□□□□ 0.52
Copb2O55029 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Copb2O55029 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Copb2O55029 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb2O55029 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.32■□□□□ 0.52
Copb2O55029 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.32■□□□□ 0.52
Copb2O55029 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Copb2O55029 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Copb2O55029 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.32■□□□□ 0.52
Copb2O55029 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Copb2O55029 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb2O55029 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Copb2O55029 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.32■□□□□ 0.52
Copb2O55029 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Copb2O55029 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Copb2O55029 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.31■□□□□ 0.52
Copb2O55029 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.31■□□□□ 0.52
Copb2O55029 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.31■□□□□ 0.52
Copb2O55029 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms