Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.17□□□□□ -0.14
Dkk1O54908 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Gm44681-201ENSMUST00000208447 842 ntBASIC14.17□□□□□ -0.14
Dkk1O54908 AC132237.2-201ENSMUST00000221702 1209 ntBASIC14.17□□□□□ -0.14
Dkk1O54908 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.17□□□□□ -0.14
Dkk1O54908 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Dkk1O54908 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.17□□□□□ -0.14
Dkk1O54908 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.17□□□□□ -0.14
Dkk1O54908 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Dkk1O54908 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dkk1O54908 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Dkk1O54908 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Dkk1O54908 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.16□□□□□ -0.14
Dkk1O54908 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.16□□□□□ -0.14
Dkk1O54908 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Dkk1O54908 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.16□□□□□ -0.14
Dkk1O54908 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC14.16□□□□□ -0.14
Dkk1O54908 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 AC154484.1-201ENSMUST00000227311 771 ntBASIC14.16□□□□□ -0.14
Dkk1O54908 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Dkk1O54908 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dkk1O54908 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dkk1O54908 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dkk1O54908 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Dkk1O54908 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Dkk1O54908 AC122539.3-201ENSMUST00000218355 1431 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.15□□□□□ -0.14
Dkk1O54908 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Dkk1O54908 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Dkk1O54908 Gm14833-201ENSMUST00000118345 1027 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Gm12507-201ENSMUST00000119155 415 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-7-201ENSMUST00000180364 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Gm37678-201ENSMUST00000192908 1146 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-6-201ENSMUST00000196127 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-12-201ENSMUST00000197274 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-5-201ENSMUST00000197439 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-10-201ENSMUST00000197745 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-11-201ENSMUST00000197952 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-4-201ENSMUST00000198665 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-9-201ENSMUST00000200087 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Mir669a-8-201ENSMUST00000200268 87 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Dkk1O54908 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Dkk1O54908 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC14.15□□□□□ -0.14
Dkk1O54908 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Desi2-202ENSMUST00000069568 1193 ntBASIC14.15□□□□□ -0.14
Dkk1O54908 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dkk1O54908 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms