Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Per1O35973 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Per1O35973 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Per1O35973 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.33■□□□□ 0.37
Per1O35973 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Per1O35973 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Per1O35973 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Per1O35973 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Per1O35973 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Per1O35973 Gm15358-201ENSMUST00000119249 520 ntBASIC17.33■□□□□ 0.36
Per1O35973 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Per1O35973 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Per1O35973 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Per1O35973 Gm27646-201ENSMUST00000183989 110 ntBASIC17.33■□□□□ 0.36
Per1O35973 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Per1O35973 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Per1O35973 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Per1O35973 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Per1O35973 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Per1O35973 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Per1O35973 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Per1O35973 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.33■□□□□ 0.36
Per1O35973 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Per1O35973 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Per1O35973 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.32■□□□□ 0.36
Per1O35973 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Per1O35973 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Gm18733-201ENSMUST00000173950 856 ntBASIC17.32■□□□□ 0.36
Per1O35973 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Per1O35973 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Per1O35973 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.31■□□□□ 0.36
Per1O35973 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Per1O35973 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.31■□□□□ 0.36
Per1O35973 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Gm12350-201ENSMUST00000121208 462 ntBASIC17.31■□□□□ 0.36
Per1O35973 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Gm2651-201ENSMUST00000203560 838 ntBASIC17.31■□□□□ 0.36
Per1O35973 Gm19164-201ENSMUST00000210667 640 ntBASIC17.31■□□□□ 0.36
Per1O35973 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.31■□□□□ 0.36
Per1O35973 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.31■□□□□ 0.36
Per1O35973 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Per1O35973 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Per1O35973 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.31■□□□□ 0.36
Per1O35973 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Per1O35973 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.3■□□□□ 0.36
Per1O35973 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Per1O35973 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.3■□□□□ 0.36
Per1O35973 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.3■□□□□ 0.36
Per1O35973 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
Per1O35973 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Per1O35973 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.3■□□□□ 0.36
Per1O35973 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.3■□□□□ 0.36
Per1O35973 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Per1O35973 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.29■□□□□ 0.36
Per1O35973 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Per1O35973 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.29■□□□□ 0.36
Per1O35973 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms