Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 App-207ENSMUST00000227737 2827 ntBASIC17.22■□□□□ 0.35
Nr1i3O35627 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.22■□□□□ 0.35
Nr1i3O35627 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.21■□□□□ 0.35
Nr1i3O35627 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Gm10252-201ENSMUST00000209541 832 ntBASIC17.21■□□□□ 0.35
Nr1i3O35627 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nr1i3O35627 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nr1i3O35627 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1i3O35627 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nr1i3O35627 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Nr1i3O35627 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nr1i3O35627 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.2■□□□□ 0.34
Nr1i3O35627 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.2■□□□□ 0.34
Nr1i3O35627 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Mir770-201ENSMUST00000103252 94 ntBASIC17.2■□□□□ 0.34
Nr1i3O35627 Gm10013-201ENSMUST00000106074 672 ntBASIC17.2■□□□□ 0.34
Nr1i3O35627 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Gm9013-201ENSMUST00000132939 882 ntBASIC17.2■□□□□ 0.34
Nr1i3O35627 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.2■□□□□ 0.34
Nr1i3O35627 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nr1i3O35627 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.2■□□□□ 0.34
Nr1i3O35627 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nr1i3O35627 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nr1i3O35627 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1i3O35627 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nr1i3O35627 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1i3O35627 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nr1i3O35627 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nr1i3O35627 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Mir6982-201ENSMUST00000184354 68 ntBASIC17.18■□□□□ 0.34
Nr1i3O35627 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nr1i3O35627 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1i3O35627 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nr1i3O35627 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1i3O35627 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1i3O35627 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms