Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clk3O35492 Gm26039-201ENSMUST00000158152 144 ntBASIC15.27■□□□□ 0.04
Clk3O35492 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.27■□□□□ 0.04
Clk3O35492 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clk3O35492 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.27■□□□□ 0.04
Clk3O35492 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clk3O35492 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clk3O35492 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clk3O35492 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clk3O35492 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Clk3O35492 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Clk3O35492 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clk3O35492 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.26■□□□□ 0.03
Clk3O35492 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Clk3O35492 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clk3O35492 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Clk3O35492 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Gm10231-201ENSMUST00000181584 441 ntBASIC15.26■□□□□ 0.03
Clk3O35492 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clk3O35492 Gm10175-202ENSMUST00000208752 441 ntBASIC15.26■□□□□ 0.03
Clk3O35492 Gm18115-201ENSMUST00000221209 621 ntBASIC15.26■□□□□ 0.03
Clk3O35492 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clk3O35492 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.26■□□□□ 0.03
Clk3O35492 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.26■□□□□ 0.03
Clk3O35492 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clk3O35492 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Clk3O35492 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Clk3O35492 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.25■□□□□ 0.03
Clk3O35492 Gm13186-201ENSMUST00000118031 316 ntBASIC15.25■□□□□ 0.03
Clk3O35492 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.25■□□□□ 0.03
Clk3O35492 Gm21559-201ENSMUST00000220638 855 ntBASIC15.25■□□□□ 0.03
Clk3O35492 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Gm8587-201ENSMUST00000076538 843 ntBASIC15.25■□□□□ 0.03
Clk3O35492 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clk3O35492 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clk3O35492 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.24■□□□□ 0.03
Clk3O35492 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Prob1-201ENSMUST00000097619 3021 ntBASIC15.24■□□□□ 0.03
Clk3O35492 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.24■□□□□ 0.03
Clk3O35492 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.24■□□□□ 0.03
Clk3O35492 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.24■□□□□ 0.03
Clk3O35492 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.24■□□□□ 0.03
Clk3O35492 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.24■□□□□ 0.03
Clk3O35492 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clk3O35492 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clk3O35492 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Clk3O35492 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms