Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Gm17983-201ENSMUST00000190766 594 ntBASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Gm38280-201ENSMUST00000192610 158 ntBASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Gm43630-201ENSMUST00000201550 776 ntBASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Gm34701-201ENSMUST00000204213 849 ntBASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Gm44548-201ENSMUST00000208929 192 ntBASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 BC021767-201ENSMUST00000126387 1716 ntBASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nkx1-1G3UXB3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gm8872-201ENSMUST00000197475 1341 ntBASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gm44719-201ENSMUST00000206404 149 ntBASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 AC147628.1-201ENSMUST00000228193 688 ntBASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx1-1G3UXB3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gm8190-201ENSMUST00000199603 586 ntBASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gm45747-201ENSMUST00000212203 999 ntBASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gm7787-201ENSMUST00000216858 688 ntBASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Syt7-205ENSMUST00000224135 1557 ntBASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx1-1G3UXB3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.28■□□□□ 0.52
Nkx1-1G3UXB3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms