Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Gm37153-201ENSMUST00000193637 231 ntBASIC19.18■□□□□ 0.66
NpcdF8VQB8 Gm45167-201ENSMUST00000208007 322 ntBASIC19.18■□□□□ 0.66
NpcdF8VQB8 Gm45612-201ENSMUST00000211320 160 ntBASIC19.18■□□□□ 0.66
NpcdF8VQB8 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.18■□□□□ 0.66
NpcdF8VQB8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.18■□□□□ 0.66
NpcdF8VQB8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NpcdF8VQB8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.17■□□□□ 0.66
NpcdF8VQB8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NpcdF8VQB8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NpcdF8VQB8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NpcdF8VQB8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Gm18622-201ENSMUST00000219361 595 ntBASIC19.16■□□□□ 0.66
NpcdF8VQB8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NpcdF8VQB8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NpcdF8VQB8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.15■□□□□ 0.66
NpcdF8VQB8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.15■□□□□ 0.66
NpcdF8VQB8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Gm4899-201ENSMUST00000178708 719 ntBASIC19.15■□□□□ 0.66
NpcdF8VQB8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.15■□□□□ 0.66
NpcdF8VQB8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NpcdF8VQB8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
NpcdF8VQB8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.14■□□□□ 0.65
NpcdF8VQB8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.14■□□□□ 0.65
NpcdF8VQB8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms