Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3hdm1E9Q9Q2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
R3hdm1E9Q9Q2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3hdm1E9Q9Q2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3hdm1E9Q9Q2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3hdm1E9Q9Q2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.64■□□□□ 0.41
R3hdm1E9Q9Q2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3hdm1E9Q9Q2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3hdm1E9Q9Q2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
R3hdm1E9Q9Q2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Gm8097-201ENSMUST00000117903 829 ntBASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Gm15920-201ENSMUST00000118998 402 ntBASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Gm10175-201ENSMUST00000086013 645 ntBASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3hdm1E9Q9Q2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3hdm1E9Q9Q2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3hdm1E9Q9Q2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms