Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a6B1AVK5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a6B1AVK5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a6B1AVK5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm22065-201ENSMUST00000103753 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm22066-201ENSMUST00000103761 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24932-201ENSMUST00000103763 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24115-201ENSMUST00000103799 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm22190-201ENSMUST00000103827 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm22191-201ENSMUST00000103831 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24721-201ENSMUST00000103849 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm28018-201ENSMUST00000103869 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm26399-201ENSMUST00000103937 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm25349-201ENSMUST00000177728 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm23616-201ENSMUST00000177797 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm25871-201ENSMUST00000177816 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24752-201ENSMUST00000178240 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24496-201ENSMUST00000178287 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm25649-201ENSMUST00000178476 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm25548-201ENSMUST00000178681 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm23147-201ENSMUST00000178841 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm26095-201ENSMUST00000179270 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm22171-201ENSMUST00000179283 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm23936-201ENSMUST00000179354 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm22619-201ENSMUST00000179516 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm25255-201ENSMUST00000179579 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24755-201ENSMUST00000179691 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm26506-201ENSMUST00000179692 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm25086-201ENSMUST00000179931 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm23243-201ENSMUST00000180047 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24659-201ENSMUST00000180212 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm24169-201ENSMUST00000180244 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm23689-201ENSMUST00000180354 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm27359-201ENSMUST00000184153 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm27785-201ENSMUST00000184268 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm27466-201ENSMUST00000184396 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm27703-201ENSMUST00000184836 110 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Haglr-201ENSMUST00000100000 2085 ntBASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a6B1AVK5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.34■□□□□ 0.21
Col4a6B1AVK5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.34■□□□□ 0.21
Col4a6B1AVK5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.33■□□□□ 0.21
Col4a6B1AVK5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a6B1AVK5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a6B1AVK5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Gm27622-201ENSMUST00000183779 60 ntBASIC16.33■□□□□ 0.2
Col4a6B1AVK5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Col4a6B1AVK5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms