Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.12■□□□□ 0.33
Sh2d4bA6X942 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d4bA6X942 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Gm43575-201ENSMUST00000196420 516 ntBASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d4bA6X942 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Gm44450-201ENSMUST00000199528 114 ntBASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Psmb5-202ENSMUST00000227257 622 ntBASIC17.1■□□□□ 0.33
Sh2d4bA6X942 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d4bA6X942 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Gm7063-201ENSMUST00000186840 981 ntBASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms