Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcna-ps2A0A140T8V5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcna-ps2A0A140T8V5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcna-ps2A0A140T8V5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gm6659-201ENSMUST00000174752 547 ntBASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcna-ps2A0A140T8V5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Prob1-201ENSMUST00000097619 3021 ntBASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcna-ps2A0A140T8V5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 AA414768-201ENSMUST00000121924 1257 ntBASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcna-ps2A0A140T8V5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcna-ps2A0A140T8V5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcna-ps2A0A140T8V5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.08■□□□□ 0.17
Pcna-ps2A0A140T8V5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcna-ps2A0A140T8V5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcna-ps2A0A140T8V5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcna-ps2A0A140T8V5 Gm9013-201ENSMUST00000132939 882 ntBASIC16.08■□□□□ 0.16
Pcna-ps2A0A140T8V5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcna-ps2A0A140T8V5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Pcna-ps2A0A140T8V5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcna-ps2A0A140T8V5 Gm29707-201ENSMUST00000196325 491 ntBASIC16.08■□□□□ 0.16
Pcna-ps2A0A140T8V5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms