Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm8825-201ENSMUST00000182565 998 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm4518-201ENSMUST00000182638 718 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm12644-201ENSMUST00000119935 606 ntBASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-1A0A0B4J1H0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm4459-201ENSMUST00000118750 468 ntBASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Birc2-201ENSMUST00000054878 378 ntBASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms