Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Gm11025-201ENSMUST00000140773 466 ntBASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Gm45167-201ENSMUST00000208007 322 ntBASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Gm7787-201ENSMUST00000216858 688 ntBASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8n-2A0A075B633 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Gm15920-201ENSMUST00000118998 402 ntBASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Gm7063-201ENSMUST00000186840 981 ntBASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8n-2A0A075B633 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Chchd1-203ENSMUST00000224633 557 ntBASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms