Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Mir1668-201ENSMUST00000184114 107 ntBASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Sybu-209ENSMUST00000228639 4113 ntBASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9-1A0A075B601 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9-1A0A075B601 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Gm15565-201ENSMUST00000118890 427 ntBASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Gm36967-201ENSMUST00000193814 266 ntBASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9-1A0A075B601 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms