Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv4A0A075B5I2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv4A0A075B5I2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv4A0A075B5I2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Trbv4A0A075B5I2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv4A0A075B5I2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trbv4A0A075B5I2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms