Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Y_RNA.76-201ENST00000362931 109 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-364P-201ENST00000384387 107 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-1319P-201ENST00000390855 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-747P-201ENST00000390928 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-241P-201ENST00000391148 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-1165P-201ENST00000410119 107 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-447P-201ENST00000410293 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-355P-201ENST00000410427 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-791P-201ENST00000410467 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-705P-201ENST00000410601 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-860P-201ENST00000410860 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-177P-201ENST00000411257 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-785P-201ENST00000411324 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 RNU4-54P-201ENST00000516428 129 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 SNORD116-25-201ENST00000516517 92 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 U6.90-201ENST00000614007 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 U6.70-201ENST00000620287 104 ntBASIC0.95□□□□□ -2.26
SHROOM4Q9ULL8 MIR4636-201ENST00000582271 80 ntBASIC0.94□□□□□ -2.26
SHROOM4Q9ULL8 AC020891.4-201ENST00000605745 93 ntBASIC0.94□□□□□ -2.26
SHROOM4Q9ULL8 MIR6740-201ENST00000618268 113 ntBASIC0.94□□□□□ -2.26
SHROOM4Q9ULL8 MIR6717-201ENST00000622747 73 ntBASIC0.94□□□□□ -2.26
SHROOM4Q9ULL8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SHROOM4Q9ULL8 Y_RNA.308-201ENST00000365043 101 ntBASIC0.93□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-327P-201ENST00000516270 127 ntBASIC0.93□□□□□ -2.26
SHROOM4Q9ULL8 MIR573-201ENST00000384964 99 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 MIR125B2-201ENST00000385128 89 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 AP003327.1-201ENST00000529684 127 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 RNY4P28-201ENST00000365281 93 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 SNORD12C-201ENST00000386307 89 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 RNU6-578P-201ENST00000390980 103 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 RNU2-38P-201ENST00000410856 79 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 MIR378D2-201ENST00000580636 98 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 AC010332.2-201ENST00000613083 1904 ntBASIC0.92□□□□□ -2.26
SHROOM4Q9ULL8 Y_RNA.65-201ENST00000362846 100 ntBASIC0.91□□□□□ -2.26
SHROOM4Q9ULL8 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
SHROOM4Q9ULL8 MIR1912-201ENST00000410389 80 ntBASIC0.91□□□□□ -2.26
SHROOM4Q9ULL8 Y_RNA.797-201ENST00000515977 94 ntBASIC0.91□□□□□ -2.26
SHROOM4Q9ULL8 RNU4-67P-201ENST00000364569 141 ntBASIC0.9□□□□□ -2.27
SHROOM4Q9ULL8 SNORA50A-201ENST00000384225 134 ntBASIC0.9□□□□□ -2.27
SHROOM4Q9ULL8 RNA5SP299-201ENST00000391203 116 ntBASIC0.9□□□□□ -2.27
SHROOM4Q9ULL8 AL157398.1-201ENST00000452981 186 ntBASIC0.9□□□□□ -2.27
SHROOM4Q9ULL8 RNU7-185P-201ENST00000459215 60 ntBASIC0.9□□□□□ -2.27
SHROOM4Q9ULL8 MIR4514-201ENST00000581410 57 ntBASIC0.9□□□□□ -2.27
SHROOM4Q9ULL8 AL365205.2-201ENST00000594586 68 ntBASIC0.9□□□□□ -2.27
SHROOM4Q9ULL8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SHROOM4Q9ULL8 MT-TF-201ENST00000387314 71 ntBASIC0.89□□□□□ -2.27
SHROOM4Q9ULL8 MIR5197-201ENST00000583721 112 ntBASIC0.89□□□□□ -2.27
SHROOM4Q9ULL8 AC011921.3-201ENST00000605540 361 ntBASIC0.89□□□□□ -2.27
SHROOM4Q9ULL8 AL596211.1-201ENST00000569873 2277 ntBASIC0.89□□□□□ -2.27
SHROOM4Q9ULL8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.88□□□□□ -2.27
SHROOM4Q9ULL8 AC015818.7-201ENST00000428754 109 ntBASIC0.88□□□□□ -2.27
SHROOM4Q9ULL8 AC087499.7-201ENST00000441958 109 ntBASIC0.88□□□□□ -2.27
SHROOM4Q9ULL8 MTND1P19-201ENST00000511780 315 ntBASIC0.88□□□□□ -2.27
SHROOM4Q9ULL8 RNY3P16-201ENST00000516338 101 ntBASIC0.88□□□□□ -2.27
SHROOM4Q9ULL8 RNU7-156P-201ENST00000517214 74 ntBASIC0.88□□□□□ -2.27
SHROOM4Q9ULL8 SNORA20-201ENST00000384662 132 ntBASIC0.87□□□□□ -2.27
SHROOM4Q9ULL8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.87□□□□□ -2.27
SHROOM4Q9ULL8 Y_RNA.133-201ENST00000363428 110 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 Y_RNA.430-201ENST00000384081 110 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 SNORA26.6-201ENST00000391256 115 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 MIR1257-201ENST00000408490 117 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 RNA5SP237-201ENST00000410414 113 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 RNU6-1190P-201ENST00000410811 104 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 MTCYBP9-201ENST00000431021 303 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 SEPT7P4-201ENST00000437076 306 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 RPL39P25-201ENST00000449384 154 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 RNU6-1045P-201ENST00000516321 107 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 AC091932.4-201ENST00000623386 200 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 Y_RNA.121-201ENST00000363309 113 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 Y_RNA.162-201ENST00000363683 102 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 SNORD27-201ENST00000363981 72 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 RNA5SP331-201ENST00000364986 107 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 Y_RNA.478-201ENST00000384358 107 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 MIR563-201ENST00000385080 79 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 RNU6-733P-201ENST00000410759 104 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 MIR3612-201ENST00000579753 87 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 AL162730.1-201ENST00000605734 292 ntBASIC0.86□□□□□ -2.27
SHROOM4Q9ULL8 Y_RNA.562-201ENST00000384695 113 ntBASIC0.85□□□□□ -2.27
SHROOM4Q9ULL8 RNU6-893P-201ENST00000458841 100 ntBASIC0.85□□□□□ -2.27
SHROOM4Q9ULL8 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.28
SHROOM4Q9ULL8 RNU4-70P-201ENST00000384579 139 ntBASIC0.84□□□□□ -2.28
SHROOM4Q9ULL8 MIR329-2-201ENST00000385029 84 ntBASIC0.84□□□□□ -2.28
SHROOM4Q9ULL8 RNA5SP25-201ENST00000410815 110 ntBASIC0.84□□□□□ -2.28
SHROOM4Q9ULL8 RNU2-4P-201ENST00000606190 192 ntBASIC0.84□□□□□ -2.28
SHROOM4Q9ULL8 uc_338.6-201ENST00000613544 171 ntBASIC0.84□□□□□ -2.28
SHROOM4Q9ULL8 Y_RNA.549-201ENST00000384657 102 ntBASIC0.83□□□□□ -2.28
SHROOM4Q9ULL8 RNU6-493P-201ENST00000391321 108 ntBASIC0.83□□□□□ -2.28
SHROOM4Q9ULL8 AC114737.2-201ENST00000421583 173 ntBASIC0.83□□□□□ -2.28
SHROOM4Q9ULL8 RNU7-45P-201ENST00000459460 63 ntBASIC0.83□□□□□ -2.28
SHROOM4Q9ULL8 AC090897.1-201ENST00000580909 226 ntBASIC0.83□□□□□ -2.28
SHROOM4Q9ULL8 SNORD92-201ENST00000585078 85 ntBASIC0.83□□□□□ -2.28
SHROOM4Q9ULL8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.83□□□□□ -2.28
SHROOM4Q9ULL8 Y_RNA.20-201ENST00000362479 113 ntBASIC0.82□□□□□ -2.28
SHROOM4Q9ULL8 Y_RNA.350-201ENST00000365409 98 ntBASIC0.82□□□□□ -2.28
SHROOM4Q9ULL8 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms