Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR30A-201ENST00000385092 71 ntBASIC2.37□□□□□ -2.03
CXXC1Q9P0U4 MIR577-201ENST00000385196 96 ntBASIC2.37□□□□□ -2.03
CXXC1Q9P0U4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.37□□□□□ -2.03
CXXC1Q9P0U4 RPL31P63-201ENST00000422565 375 ntBASIC2.37□□□□□ -2.03
CXXC1Q9P0U4 AL512310.12-203ENST00000640543 90 ntBASIC2.37□□□□□ -2.03
CXXC1Q9P0U4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CXXC1Q9P0U4 ZNF355P-201ENST00000427301 3216 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 RNU6-679P-201ENST00000391003 106 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 RNA5SP237-201ENST00000410414 113 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 MTATP8P2-201ENST00000435212 202 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 RNU7-2P-201ENST00000516096 62 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 RNU6-947P-201ENST00000516264 106 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 AL096861.1-201ENST00000610899 123 ntBASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CXXC1Q9P0U4 SNORD33-201ENST00000362761 85 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 MIR583-201ENST00000384846 75 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 SNORA17.3-201ENST00000391159 129 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 AC090844.1-201ENST00000422019 156 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 MIR3670-2-201ENST00000582974 65 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 MIR3670-1-201ENST00000584160 65 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 MIR3670-3-201ENST00000584855 65 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 MIR3192-201ENST00000584920 77 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 AC096720.1-201ENST00000604441 183 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 AL359821.1-201ENST00000605519 182 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CXXC1Q9P0U4 SNORD115-35-201ENST00000365122 82 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 AC019129.1-201ENST00000403786 261 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 RNA5SP233-201ENST00000459153 113 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 TRMT112P2-201ENST00000512910 132 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 AC103810.8-201ENST00000607347 118 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 AL627230.6-201ENST00000611129 280 ntBASIC2.34□□□□□ -2.03
CXXC1Q9P0U4 SNORD45B-201ENST00000364617 72 ntBASIC2.33□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1237P-201ENST00000384777 107 ntBASIC2.33□□□□□ -2.04
CXXC1Q9P0U4 RNU7-79P-201ENST00000516082 62 ntBASIC2.33□□□□□ -2.04
CXXC1Q9P0U4 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
CXXC1Q9P0U4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CXXC1Q9P0U4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CXXC1Q9P0U4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CXXC1Q9P0U4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 Y_RNA.220-201ENST00000364244 109 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 RNU6-396P-201ENST00000365369 105 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1201P-201ENST00000384227 107 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1065P-201ENST00000384513 106 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 MIR206-201ENST00000384872 86 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 AC079140.2-201ENST00000506193 142 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 AL442128.1-201ENST00000615151 90 ntBASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CXXC1Q9P0U4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1131P-201ENST00000364955 107 ntBASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 BTF3P4-201ENST00000418852 495 ntBASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 AL353813.1-201ENST00000440700 253 ntBASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 SNORD67.1-201ENST00000516618 108 ntBASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 MIR4679-1-201ENST00000637619 75 ntBASIC2.31□□□□□ -2.04
CXXC1Q9P0U4 Y_RNA.96-201ENST00000363092 109 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 SNORD114-10-201ENST00000363409 72 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-865P-201ENST00000364772 107 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-447P-201ENST00000410293 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1118P-201ENST00000410382 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1076P-201ENST00000410397 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-355P-201ENST00000410427 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-791P-201ENST00000410467 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-705P-201ENST00000410601 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1100P-201ENST00000410691 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-860P-201ENST00000410860 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-1217P-201ENST00000411276 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNU6-785P-201ENST00000411324 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 AC005908.1-201ENST00000468701 347 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 Y_RNA.659-201ENST00000515994 113 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 RNA5SP182-201ENST00000516064 82 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 MIR3937-201ENST00000580135 106 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 AP000753.3-201ENST00000604083 169 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 U6.90-201ENST00000614007 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 U6.70-201ENST00000620287 104 ntBASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.3□□□□□ -2.04
CXXC1Q9P0U4 SNORA25.3-201ENST00000363205 127 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 RPL30P7-201ENST00000479312 323 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 MIR2115-201ENST00000516657 100 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 RNA5SP82-201ENST00000516707 92 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 AC019176.1-201ENST00000518519 225 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 MIR3198-2-201ENST00000577868 80 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 SNRPGP19-201ENST00000603826 189 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 PRELID3BP2-201ENST00000605362 201 ntBASIC2.29□□□□□ -2.04
CXXC1Q9P0U4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms