Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
PCDH18Q9HCL0 MIR8055-201ENST00000610739 97 ntBASIC1.97□□□□□ -2.09
PCDH18Q9HCL0 U7.3-201ENST00000616123 62 ntBASIC1.97□□□□□ -2.09
PCDH18Q9HCL0 AC105081.1-201ENST00000617727 106 ntBASIC1.97□□□□□ -2.09
PCDH18Q9HCL0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.97□□□□□ -2.09
PCDH18Q9HCL0 Y_RNA.247-201ENST00000364500 92 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 RNU6-360P-201ENST00000390944 104 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 snoU13.16-201ENST00000459350 104 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 RNU1-41P-201ENST00000516161 162 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 RNU1-48P-201ENST00000516400 162 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 RNU6-922P-201ENST00000516753 99 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PCDH18Q9HCL0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 RNU6-573P-201ENST00000383938 106 ntBASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 SNORA70B-201ENST00000384210 135 ntBASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 RNU6-602P-201ENST00000411155 105 ntBASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 MRPL35P3-201ENST00000421557 364 ntBASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 AC026421.1-201ENST00000519101 163 ntBASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 AC022254.1-201ENST00000567857 235 ntBASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 MIR2052-201ENST00000636055 55 ntBASIC1.95□□□□□ -2.1
PCDH18Q9HCL0 RNA5SP173-201ENST00000364857 136 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 RNU6-1201P-201ENST00000384227 107 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 MIR513A1-201ENST00000385138 129 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 BTF3P4-201ENST00000418852 495 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 RNU6-947P-201ENST00000516264 106 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 RNU7-43P-201ENST00000516554 64 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 MIR3945-201ENST00000581853 98 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 MIR4777-201ENST00000583710 86 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 MIR376B-201ENST00000614515 100 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 MIR8065-201ENST00000620577 100 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 MIR4251-201ENST00000635819 61 ntBASIC1.94□□□□□ -2.1
PCDH18Q9HCL0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 SNORA25.3-201ENST00000363205 127 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 Y_RNA.190-201ENST00000363964 101 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 Y_RNA.466-201ENST00000384294 113 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 MIR206-201ENST00000384872 86 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 MIR194-1-201ENST00000384892 85 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 MIR1302-4-201ENST00000408701 150 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 RNU6-592P-201ENST00000411333 103 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 UBL5P1-201ENST00000507979 193 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 SNORD67.1-201ENST00000516618 108 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 CYP3A52P-201ENST00000563326 91 ntBASIC1.93□□□□□ -2.1
PCDH18Q9HCL0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 RNY1P10-201ENST00000363268 113 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 RNU6-60P-201ENST00000364792 103 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 AC004941.2-201ENST00000427009 228 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 AC003989.2-201ENST00000440224 169 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 AC009474.2-201ENST00000451383 136 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 RNU7-2P-201ENST00000516096 62 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 RNU6-158P-201ENST00000517104 100 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PCDH18Q9HCL0 Y_RNA.10-201ENST00000362371 110 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 SNORA16.1-201ENST00000364597 132 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 SNORD115-35-201ENST00000365122 82 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 MIR34C-201ENST00000384831 77 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 AC027119.1-201ENST00000440877 241 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 AC109327.2-201ENST00000448339 378 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 RNU7-79P-201ENST00000516082 62 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 MIR3192-201ENST00000584920 77 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 Z97988.1-201ENST00000637697 135 ntBASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDH18Q9HCL0 AL451046.2-201ENST00000403074 277 ntBASIC1.9□□□□□ -2.11
PCDH18Q9HCL0 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
PCDH18Q9HCL0 AC108729.3-201ENST00000513484 108 ntBASIC1.9□□□□□ -2.11
PCDH18Q9HCL0 RNU6-322P-201ENST00000516010 103 ntBASIC1.9□□□□□ -2.11
PCDH18Q9HCL0 SNORD111.1-201ENST00000516421 86 ntBASIC1.9□□□□□ -2.11
PCDH18Q9HCL0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 Y_RNA.95-201ENST00000363079 95 ntBASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 SNORD41-201ENST00000386967 70 ntBASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 Y_RNA.593-201ENST00000410292 98 ntBASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 AL161722.3-201ENST00000605789 2983 ntBASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 RNU6-86P-201ENST00000606534 107 ntBASIC1.89□□□□□ -2.11
PCDH18Q9HCL0 Y_RNA.17-201ENST00000362433 111 ntBASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 SNORD45B-201ENST00000364617 72 ntBASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 RN7SKP12-201ENST00000516275 143 ntBASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 RNU7-35P-201ENST00000517174 62 ntBASIC1.88□□□□□ -2.11
PCDH18Q9HCL0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms