Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIR3149-201ENST00000584629 83 ntBASIC0.55□□□□□ -2.32
PDGFRAP16234 SNORA20.1-201ENST00000364790 130 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 RNU6-275P-201ENST00000364910 107 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 RNU4-45P-201ENST00000365469 141 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 Y_RNA.412-201ENST00000384001 104 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 SNORA36.2-201ENST00000384004 127 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 MIR613-201ENST00000385248 95 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 AL596211.1-201ENST00000569873 2277 ntBASIC0.54□□□□□ -2.32
PDGFRAP16234 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PDGFRAP16234 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
PDGFRAP16234 MIR302B-201ENST00000362188 73 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 RNU6-597P-201ENST00000365620 102 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 RNU4-70P-201ENST00000384579 139 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 RNU6-1237P-201ENST00000384777 107 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 RNU6-918P-201ENST00000391219 106 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 MIR938-201ENST00000401216 83 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 AL078595.1-201ENST00000404458 226 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 RNU7-80P-201ENST00000459562 61 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 SCARNA15-202ENST00000516881 127 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 U6.106-201ENST00000636360 105 ntBASIC0.53□□□□□ -2.32
PDGFRAP16234 MIR30D-201ENST00000362283 70 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 Y_RNA.144-201ENST00000363521 113 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 Y_RNA.454-201ENST00000384224 113 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 RNU6-463P-201ENST00000384340 107 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 Y_RNA.540-201ENST00000384638 111 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 MIR140-201ENST00000385282 100 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 RNA5SP127-201ENST00000411051 133 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.52□□□□□ -2.33
PDGFRAP16234 RN7SKP12-201ENST00000516275 143 ntBASIC0.52□□□□□ -2.33
PDGFRAP16234 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.52□□□□□ -2.33
PDGFRAP16234 MIR411-201ENST00000362239 96 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 MIR18A-201ENST00000362310 71 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 Y_RNA.75-201ENST00000362927 97 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 RNU6-47P-201ENST00000383866 107 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 MIR624-201ENST00000385217 97 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 RNU6-1319P-201ENST00000390855 104 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 RNU6-747P-201ENST00000390928 104 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 RNU6-241P-201ENST00000391148 104 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 RNU6-1149P-201ENST00000516810 97 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.51□□□□□ -2.33
PDGFRAP16234 MRPS18CP4-201ENST00000535821 231 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 AL162730.1-201ENST00000605734 292 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 MIR6841-201ENST00000637129 72 ntBASIC0.51□□□□□ -2.33
PDGFRAP16234 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
PDGFRAP16234 Y_RNA.200-201ENST00000364018 102 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 RNU6-1336P-201ENST00000383886 109 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 Y_RNA.430-201ENST00000384081 110 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 Y_RNA.435-201ENST00000384095 112 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 MIR125B2-201ENST00000385128 89 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 MIR1257-201ENST00000408490 117 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 RNA5SP261-201ENST00000410536 106 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 RNU7-185P-201ENST00000459215 60 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
PDGFRAP16234 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
PDGFRAP16234 Y_RNA.393-201ENST00000383936 102 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 MIR216A-201ENST00000385063 110 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 MT-TF-201ENST00000387314 71 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 AC130289.1-201ENST00000577321 73 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 MIR4711-201ENST00000578274 70 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 AC008608.1-201ENST00000603910 127 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 AC009779.6-201ENST00000603972 165 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 AC021613.1-201ENST00000623880 111 ntBASIC0.49□□□□□ -2.33
PDGFRAP16234 MTND5P32-201ENST00000560711 1802 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 Y_RNA.83-201ENST00000363005 113 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU4-16P-201ENST00000364737 141 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-447P-201ENST00000410293 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-1118P-201ENST00000410382 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-1076P-201ENST00000410397 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-355P-201ENST00000410427 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-791P-201ENST00000410467 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-705P-201ENST00000410601 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-1100P-201ENST00000410691 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-860P-201ENST00000410860 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-1217P-201ENST00000411276 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RNU6-785P-201ENST00000411324 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 AC090897.1-201ENST00000580909 226 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 RN7SL793P-201ENST00000583259 296 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 SNORD92-201ENST00000585078 85 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 U6.90-201ENST00000614007 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 AL662814.1-201ENST00000617364 121 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 U6.70-201ENST00000620287 104 ntBASIC0.48□□□□□ -2.33
PDGFRAP16234 SNORA22.1-201ENST00000362701 134 ntBASIC0.47□□□□□ -2.33
PDGFRAP16234 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
PDGFRAP16234 SNORA25.7-201ENST00000364375 127 ntBASIC0.47□□□□□ -2.33
PDGFRAP16234 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
PDGFRAP16234 SNORD100-201ENST00000408573 76 ntBASIC0.47□□□□□ -2.33
PDGFRAP16234 RNU7-102P-201ENST00000458948 62 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms