Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR3152-201ENST00000579801 74 ntBASIC0.65□□□□□ -2.31
RAB40ALP0C0E4 MIR4804-201ENST00000581683 73 ntBASIC0.65□□□□□ -2.31
RAB40ALP0C0E4 AL162730.1-201ENST00000605734 292 ntBASIC0.65□□□□□ -2.31
RAB40ALP0C0E4 MIR411-201ENST00000362239 96 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.75-201ENST00000362927 97 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 SNORA25.7-201ENST00000364375 127 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 MIR573-201ENST00000384964 99 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 MIR624-201ENST00000385217 97 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1319P-201ENST00000390855 104 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 RNU6-747P-201ENST00000390928 104 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 RNU6-241P-201ENST00000391148 104 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 MIR938-201ENST00000401216 83 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 MIR1257-201ENST00000408490 117 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 RNU6-177P-201ENST00000411257 104 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 U6.106-201ENST00000636360 105 ntBASIC0.64□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.83-201ENST00000363005 113 ntBASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.521-201ENST00000384560 114 ntBASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 MIR563-201ENST00000385080 79 ntBASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 MT-TF-201ENST00000387314 71 ntBASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 RNA5SP237-201ENST00000410414 113 ntBASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1020P-201ENST00000363684 107 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.489-201ENST00000384410 101 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 RNU6-918P-201ENST00000391219 106 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 RPL39P25-201ENST00000449384 154 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 RNU7-185P-201ENST00000459215 60 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1149P-201ENST00000516810 97 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
RAB40ALP0C0E4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 RNU6-364P-201ENST00000384387 107 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 MIR7-2-201ENST00000384970 110 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 MIR125B2-201ENST00000385128 89 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 RNU7-56P-201ENST00000458744 62 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 SCARNA15-202ENST00000516881 127 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 MRPS18CP4-201ENST00000535821 231 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 MIR4431-201ENST00000579990 94 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 AC021613.1-201ENST00000623880 111 ntBASIC0.61□□□□□ -2.31
RAB40ALP0C0E4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
RAB40ALP0C0E4 MIR30D-201ENST00000362283 70 ntBASIC0.6□□□□□ -2.31
RAB40ALP0C0E4 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
RAB40ALP0C0E4 Y_RNA.435-201ENST00000384095 112 ntBASIC0.6□□□□□ -2.31
RAB40ALP0C0E4 MIR216A-201ENST00000385063 110 ntBASIC0.6□□□□□ -2.31
RAB40ALP0C0E4 AC009779.6-201ENST00000603972 165 ntBASIC0.6□□□□□ -2.31
RAB40ALP0C0E4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.6□□□□□ -2.31
RAB40ALP0C0E4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 SNORA22.1-201ENST00000362701 134 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-597P-201ENST00000365620 102 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-47P-201ENST00000383866 107 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-447P-201ENST00000410293 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-355P-201ENST00000410427 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-791P-201ENST00000410467 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-705P-201ENST00000410601 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-860P-201ENST00000410860 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU6-785P-201ENST00000411324 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 RNU7-156P-201ENST00000517214 74 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 U6.90-201ENST00000614007 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 AL662814.1-201ENST00000617364 121 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 U6.70-201ENST00000620287 104 ntBASIC0.59□□□□□ -2.31
RAB40ALP0C0E4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.32
RAB40ALP0C0E4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
RAB40ALP0C0E4 RNU4-16P-201ENST00000364737 141 ntBASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 Y_RNA.515-201ENST00000384535 112 ntBASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 AC130289.1-201ENST00000577321 73 ntBASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 MIR3612-201ENST00000579753 87 ntBASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 MIR6841-201ENST00000637129 72 ntBASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 MTND5P32-201ENST00000560711 1802 ntBASIC0.58□□□□□ -2.32
RAB40ALP0C0E4 RNU6-1336P-201ENST00000383886 109 ntBASIC0.57□□□□□ -2.32
RAB40ALP0C0E4 SNORD93-201ENST00000408813 74 ntBASIC0.57□□□□□ -2.32
RAB40ALP0C0E4 AC107027.2-201ENST00000512197 115 ntBASIC0.57□□□□□ -2.32
RAB40ALP0C0E4 RNU6-312P-201ENST00000364629 107 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNU4-45P-201ENST00000365469 141 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNY1P6-201ENST00000384193 109 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 MIR140-201ENST00000385282 100 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNU6-893P-201ENST00000458841 100 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 SNORD92-201ENST00000585078 85 ntBASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.56□□□□□ -2.32
RAB40ALP0C0E4 AC008608.1-201ENST00000603910 127 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms