Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNA5SP127-201ENST00000411051 133 ntBASIC0.73□□□□□ -2.29
RTN3O95197 SEPT7P4-201ENST00000437076 306 ntBASIC0.73□□□□□ -2.29
RTN3O95197 MIR3152-201ENST00000579801 74 ntBASIC0.73□□□□□ -2.29
RTN3O95197 MIR4308-201ENST00000580634 81 ntBASIC0.73□□□□□ -2.29
RTN3O95197 MIR924-201ENST00000638017 53 ntBASIC0.73□□□□□ -2.29
RTN3O95197 AL596211.1-201ENST00000569873 2277 ntBASIC0.72□□□□□ -2.29
RTN3O95197 Y_RNA.60-201ENST00000362831 98 ntBASIC0.72□□□□□ -2.29
RTN3O95197 Y_RNA.258-201ENST00000364613 105 ntBASIC0.72□□□□□ -2.29
RTN3O95197 Y_RNA.452-201ENST00000384202 108 ntBASIC0.72□□□□□ -2.29
RTN3O95197 MIR563-201ENST00000385080 79 ntBASIC0.72□□□□□ -2.29
RTN3O95197 SNORD12C-201ENST00000386307 89 ntBASIC0.72□□□□□ -2.29
RTN3O95197 MT-TF-201ENST00000387314 71 ntBASIC0.72□□□□□ -2.29
RTN3O95197 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
RTN3O95197 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.72□□□□□ -2.29
RTN3O95197 AC020891.4-201ENST00000605745 93 ntBASIC0.72□□□□□ -2.29
RTN3O95197 AC010487.4-201ENST00000637027 61 ntBASIC0.72□□□□□ -2.29
RTN3O95197 RNU6-275P-201ENST00000364910 107 ntBASIC0.71□□□□□ -2.3
RTN3O95197 Y_RNA.430-201ENST00000384081 110 ntBASIC0.71□□□□□ -2.3
RTN3O95197 Y_RNA.447-201ENST00000384184 113 ntBASIC0.71□□□□□ -2.3
RTN3O95197 MIR938-201ENST00000401216 83 ntBASIC0.71□□□□□ -2.3
RTN3O95197 MIR1257-201ENST00000408490 117 ntBASIC0.71□□□□□ -2.3
RTN3O95197 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
RTN3O95197 RNU7-45P-201ENST00000459460 63 ntBASIC0.71□□□□□ -2.3
RTN3O95197 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.71□□□□□ -2.3
RTN3O95197 MIR4503-201ENST00000582187 83 ntBASIC0.71□□□□□ -2.3
RTN3O95197 AL109933.3-201ENST00000619095 188 ntBASIC0.71□□□□□ -2.3
RTN3O95197 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
RTN3O95197 SNORA20-201ENST00000384662 132 ntBASIC0.7□□□□□ -2.3
RTN3O95197 MIR624-201ENST00000385217 97 ntBASIC0.7□□□□□ -2.3
RTN3O95197 RNU6-1319P-201ENST00000390855 104 ntBASIC0.7□□□□□ -2.3
RTN3O95197 RNU6-747P-201ENST00000390928 104 ntBASIC0.7□□□□□ -2.3
RTN3O95197 RNU6-241P-201ENST00000391148 104 ntBASIC0.7□□□□□ -2.3
RTN3O95197 RNU6-177P-201ENST00000411257 104 ntBASIC0.7□□□□□ -2.3
RTN3O95197 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
RTN3O95197 Y_RNA.680-201ENST00000516441 93 ntBASIC0.7□□□□□ -2.3
RTN3O95197 RNU6-111P-201ENST00000517179 105 ntBASIC0.7□□□□□ -2.3
RTN3O95197 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.7□□□□□ -2.3
RTN3O95197 AC099654.10-201ENST00000640395 161 ntBASIC0.7□□□□□ -2.3
RTN3O95197 Y_RNA.307-201ENST00000365022 117 ntBASIC0.69□□□□□ -2.3
RTN3O95197 RNU7-56P-201ENST00000458744 62 ntBASIC0.69□□□□□ -2.3
RTN3O95197 RNU7-185P-201ENST00000459215 60 ntBASIC0.69□□□□□ -2.3
RTN3O95197 AC004817.2-201ENST00000561794 651 ntBASIC0.69□□□□□ -2.3
RTN3O95197 MIR3149-201ENST00000584629 83 ntBASIC0.69□□□□□ -2.3
RTN3O95197 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
RTN3O95197 Y_RNA.75-201ENST00000362927 97 ntBASIC0.68□□□□□ -2.3
RTN3O95197 SNORA25.7-201ENST00000364375 127 ntBASIC0.68□□□□□ -2.3
RTN3O95197 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
RTN3O95197 SNORA36.2-201ENST00000384004 127 ntBASIC0.68□□□□□ -2.3
RTN3O95197 MIR125B2-201ENST00000385128 89 ntBASIC0.68□□□□□ -2.3
RTN3O95197 AC004812.1-201ENST00000540773 146 ntBASIC0.68□□□□□ -2.3
RTN3O95197 MIR30D-201ENST00000362283 70 ntBASIC0.67□□□□□ -2.3
RTN3O95197 Y_RNA.85-201ENST00000363014 111 ntBASIC0.67□□□□□ -2.3
RTN3O95197 RNA5SP257-201ENST00000363023 116 ntBASIC0.67□□□□□ -2.3
RTN3O95197 Y_RNA.433-201ENST00000384089 102 ntBASIC0.67□□□□□ -2.3
RTN3O95197 RNU6-364P-201ENST00000384387 107 ntBASIC0.67□□□□□ -2.3
RTN3O95197 MIR8087-201ENST00000612745 78 ntBASIC0.67□□□□□ -2.3
RTN3O95197 Y_RNA.200-201ENST00000364018 102 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-716P-201ENST00000365621 103 ntBASIC0.66□□□□□ -2.3
RTN3O95197 Y_RNA.435-201ENST00000384095 112 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-463P-201ENST00000384340 107 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-447P-201ENST00000410293 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNA5SP193-201ENST00000410353 107 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-1118P-201ENST00000410382 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-1076P-201ENST00000410397 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNA5SP237-201ENST00000410414 113 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-355P-201ENST00000410427 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-791P-201ENST00000410467 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-705P-201ENST00000410601 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-1100P-201ENST00000410691 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-860P-201ENST00000410860 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-1217P-201ENST00000411276 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNU6-785P-201ENST00000411324 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
RTN3O95197 SCARNA15-202ENST00000516881 127 ntBASIC0.66□□□□□ -2.3
RTN3O95197 Z83818.1-201ENST00000603584 150 ntBASIC0.66□□□□□ -2.3
RTN3O95197 AL353621.2-201ENST00000605340 133 ntBASIC0.66□□□□□ -2.3
RTN3O95197 U6.90-201ENST00000614007 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 U6.70-201ENST00000620287 104 ntBASIC0.66□□□□□ -2.3
RTN3O95197 AC021613.1-201ENST00000623880 111 ntBASIC0.66□□□□□ -2.3
RTN3O95197 Y_RNA.412-201ENST00000384001 104 ntBASIC0.65□□□□□ -2.31
RTN3O95197 RNU6-1149P-201ENST00000516810 97 ntBASIC0.65□□□□□ -2.31
RTN3O95197 MRPS18CP4-201ENST00000535821 231 ntBASIC0.65□□□□□ -2.31
RTN3O95197 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
RTN3O95197 MIR3612-201ENST00000579753 87 ntBASIC0.65□□□□□ -2.31
RTN3O95197 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.65□□□□□ -2.31
RTN3O95197 AL662814.1-201ENST00000617364 121 ntBASIC0.65□□□□□ -2.31
RTN3O95197 U6.106-201ENST00000636360 105 ntBASIC0.65□□□□□ -2.31
RTN3O95197 MIR411-201ENST00000362239 96 ntBASIC0.64□□□□□ -2.31
RTN3O95197 Y_RNA.83-201ENST00000363005 113 ntBASIC0.64□□□□□ -2.31
RTN3O95197 RNU6-597P-201ENST00000365620 102 ntBASIC0.64□□□□□ -2.31
RTN3O95197 Y_RNA.515-201ENST00000384535 112 ntBASIC0.64□□□□□ -2.31
RTN3O95197 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
RTN3O95197 RNU6-918P-201ENST00000391219 106 ntBASIC0.64□□□□□ -2.31
RTN3O95197 RPL39P25-201ENST00000449384 154 ntBASIC0.64□□□□□ -2.31
RTN3O95197 RNU6-893P-201ENST00000458841 100 ntBASIC0.64□□□□□ -2.31
RTN3O95197 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
RTN3O95197 MIR4711-201ENST00000578274 70 ntBASIC0.64□□□□□ -2.31
RTN3O95197 SNORD92-201ENST00000585078 85 ntBASIC0.64□□□□□ -2.31
RTN3O95197 MIR6841-201ENST00000637129 72 ntBASIC0.64□□□□□ -2.31
RTN3O95197 SNORA22.1-201ENST00000362701 134 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms