Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 MIR4771-1-201ENST00000582617 74 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 uc_338.6-201ENST00000613544 171 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.75□□□□□ -2.29
XRCC3O43542 PVT1_3.1-201ENST00000620853 95 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 SNORD114-26-201ENST00000363543 72 ntBASIC0.74□□□□□ -2.29
XRCC3O43542 RNU6-200P-201ENST00000364743 107 ntBASIC0.74□□□□□ -2.29
XRCC3O43542 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
XRCC3O43542 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
XRCC3O43542 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
XRCC3O43542 AC022559.1-201ENST00000520905 205 ntBASIC0.74□□□□□ -2.29
XRCC3O43542 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
XRCC3O43542 Y_RNA.205-201ENST00000364128 113 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 Y_RNA.337-201ENST00000365312 102 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 RNU6-768P-201ENST00000384683 107 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 Y_RNA.793-201ENST00000411222 111 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 RNU6-977P-201ENST00000516411 103 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 AC021613.1-201ENST00000623880 111 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 MIR6841-201ENST00000637129 72 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 AC010332.2-201ENST00000613083 1904 ntBASIC0.73□□□□□ -2.29
XRCC3O43542 RNU6-1336P-201ENST00000383886 109 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 SNORA20-201ENST00000384662 132 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 MT-TF-201ENST00000387314 71 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 RNA5SP436-201ENST00000516020 115 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 MIR4804-201ENST00000581683 73 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 MIR4676-201ENST00000583078 72 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 AC020891.4-201ENST00000605745 93 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 MIR6767-201ENST00000637302 66 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 MTND5P32-201ENST00000560711 1802 ntBASIC0.72□□□□□ -2.29
XRCC3O43542 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
XRCC3O43542 MIR30D-201ENST00000362283 70 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 RNY1P4-201ENST00000384595 115 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 AC244098.3-201ENST00000424803 96 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.71□□□□□ -2.3
XRCC3O43542 RNU6-138P-201ENST00000515952 107 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 Y_RNA.700-201ENST00000516806 100 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 AP002392.1-201ENST00000537692 208 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 MIR5000-201ENST00000577717 103 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
XRCC3O43542 RNU6-1082P-201ENST00000364574 107 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 Y_RNA.540-201ENST00000384638 111 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 MIR532-201ENST00000385025 91 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 MIR216A-201ENST00000385063 110 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 RNU6-239P-201ENST00000390990 99 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 RNU1-119P-201ENST00000391122 165 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 AC015818.7-201ENST00000428754 109 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 AC087499.7-201ENST00000441958 109 ntBASIC0.7□□□□□ -2.3
XRCC3O43542 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 SNORA22.1-201ENST00000362701 134 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 Y_RNA.52-201ENST00000362760 96 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 RNU4-84P-201ENST00000364200 139 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 Y_RNA.240-201ENST00000364469 95 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 Y_RNA.357-201ENST00000365487 109 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 SNORA75.5-201ENST00000391291 81 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 RNU7-56P-201ENST00000458744 62 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 RNU6-893P-201ENST00000458841 100 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 RNU7-185P-201ENST00000459215 60 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 RNU7-120P-201ENST00000459334 63 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 RNU7-121P-201ENST00000516604 62 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 MIR3646-201ENST00000578301 84 ntBASIC0.69□□□□□ -2.3
XRCC3O43542 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
XRCC3O43542 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 Y_RNA.257-201ENST00000364596 102 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 MIR125B2-201ENST00000385128 89 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 MIR938-201ENST00000401216 83 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 RNA5SP236-201ENST00000516169 116 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.68□□□□□ -2.3
XRCC3O43542 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.68□□□□□ -2.3
XRCC3O43542 Y_RNA.29-201ENST00000362570 113 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 RNU6-818P-201ENST00000364837 108 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 RNY1P6-201ENST00000384193 109 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 Y_RNA.785-201ENST00000384290 109 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 MIR520H-201ENST00000385126 88 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 AL662814.1-201ENST00000617364 121 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 MIR6844-201ENST00000637122 62 ntBASIC0.67□□□□□ -2.3
XRCC3O43542 RNU6-682P-201ENST00000363843 106 ntBASIC0.66□□□□□ -2.3
XRCC3O43542 Y_RNA.441-201ENST00000384123 112 ntBASIC0.66□□□□□ -2.3
XRCC3O43542 MIR1257-201ENST00000408490 117 ntBASIC0.66□□□□□ -2.3
XRCC3O43542 RNA5SP237-201ENST00000410414 113 ntBASIC0.66□□□□□ -2.3
XRCC3O43542 RNU5E-9P-201ENST00000411164 104 ntBASIC0.66□□□□□ -2.3
XRCC3O43542 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
XRCC3O43542 RN7SL793P-201ENST00000583259 296 ntBASIC0.66□□□□□ -2.3
XRCC3O43542 RNU6-349P-201ENST00000362402 107 ntBASIC0.65□□□□□ -2.31
XRCC3O43542 RNU4-16P-201ENST00000364737 141 ntBASIC0.65□□□□□ -2.31
XRCC3O43542 RNU6-1318P-201ENST00000365389 103 ntBASIC0.65□□□□□ -2.31
XRCC3O43542 RNU6-1237P-201ENST00000384777 107 ntBASIC0.65□□□□□ -2.31
XRCC3O43542 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
XRCC3O43542 RNU6-861P-201ENST00000516745 106 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms