Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SNORA59A-201ENST00000459326 152 ntBASIC2.79□□□□□ -1.96
NUCKS1Q9H1E3 MIR5694-201ENST00000581190 76 ntBASIC2.79□□□□□ -1.96
NUCKS1Q9H1E3 FAM106DP-201ENST00000586416 501 ntBASIC2.79□□□□□ -1.96
NUCKS1Q9H1E3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.79□□□□□ -1.96
NUCKS1Q9H1E3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
NUCKS1Q9H1E3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 RNU6-859P-201ENST00000362728 107 ntBASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 SNORD114-10-201ENST00000363409 72 ntBASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 RNA5SP138-201ENST00000365098 114 ntBASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 RNA5SP184-201ENST00000411071 108 ntBASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 RNU7-48P-201ENST00000458875 63 ntBASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 AC006023.1-201ENST00000603944 259 ntBASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUCKS1Q9H1E3 RNU6-315P-201ENST00000362666 107 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 SNORD38.2-201ENST00000384470 69 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 MIR597-201ENST00000384968 97 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-447P-201ENST00000410293 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-1118P-201ENST00000410382 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-1076P-201ENST00000410397 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-355P-201ENST00000410427 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-791P-201ENST00000410467 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-705P-201ENST00000410601 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-1100P-201ENST00000410691 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-860P-201ENST00000410860 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-1217P-201ENST00000411276 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-785P-201ENST00000411324 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 RPL23AP6-201ENST00000446637 472 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 AC090255.1-201ENST00000495779 349 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 MIR4672-201ENST00000583126 81 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 AC021506.2-201ENST00000612354 169 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 U6.90-201ENST00000614007 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 U7.4-201ENST00000614961 63 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 U6.70-201ENST00000620287 104 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 Z97988.1-201ENST00000637697 135 ntBASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NUCKS1Q9H1E3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUCKS1Q9H1E3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.76□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-480P-201ENST00000384332 107 ntBASIC2.76□□□□□ -1.97
NUCKS1Q9H1E3 SNORA2B-201ENST00000384583 137 ntBASIC2.76□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-602P-201ENST00000411155 105 ntBASIC2.76□□□□□ -1.97
NUCKS1Q9H1E3 MTND5P40-201ENST00000559945 246 ntBASIC2.76□□□□□ -1.97
NUCKS1Q9H1E3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.76□□□□□ -1.97
NUCKS1Q9H1E3 Y_RNA.98-201ENST00000363109 102 ntBASIC2.75□□□□□ -1.97
NUCKS1Q9H1E3 Y_RNA.545-201ENST00000384652 105 ntBASIC2.75□□□□□ -1.97
NUCKS1Q9H1E3 MIR660-201ENST00000385235 97 ntBASIC2.75□□□□□ -1.97
NUCKS1Q9H1E3 RNU7-153P-201ENST00000516455 62 ntBASIC2.75□□□□□ -1.97
NUCKS1Q9H1E3 AL513423.1-201ENST00000621695 132 ntBASIC2.75□□□□□ -1.97
NUCKS1Q9H1E3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
NUCKS1Q9H1E3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 RNA5SP456-201ENST00000364002 114 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-519P-201ENST00000410590 108 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 AC087499.7-201ENST00000441958 109 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 UBE2DNL-203ENST00000474922 222 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 AC234781.5-201ENST00000508429 271 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 RNA5SP437-201ENST00000517249 129 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 MIR3162-201ENST00000581818 82 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 AL449363.1-201ENST00000617815 186 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 AP001362.1-201ENST00000625165 124 ntBASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NUCKS1Q9H1E3 Y_RNA.168-201ENST00000363740 102 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-478P-201ENST00000363904 110 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 MIR196B-201ENST00000384852 84 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 RNU6-129P-201ENST00000391022 107 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 RNU11-3P-201ENST00000391111 133 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 AC004223.1-201ENST00000479840 271 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 AC099513.1-201ENST00000490423 301 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 SNORA25.13-201ENST00000516395 103 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 SNORA74.3-201ENST00000517108 154 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NUCKS1Q9H1E3 RNA5SP133-201ENST00000363368 119 ntBASIC2.72□□□□□ -1.97
NUCKS1Q9H1E3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUCKS1Q9H1E3 RNVU1-2-201ENST00000516326 135 ntBASIC2.72□□□□□ -1.97
NUCKS1Q9H1E3 MIR6840-201ENST00000611937 71 ntBASIC2.72□□□□□ -1.97
NUCKS1Q9H1E3 U4.3-201ENST00000621047 82 ntBASIC2.72□□□□□ -1.97
NUCKS1Q9H1E3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 RNU1-52P-201ENST00000384190 164 ntBASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 MIR520A-201ENST00000384862 85 ntBASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 MIR1236-201ENST00000408340 102 ntBASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 MIR1283-2-201ENST00000408621 87 ntBASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 SNORD14A-201ENST00000606526 91 ntBASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUCKS1Q9H1E3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 RNY1P13-201ENST00000365030 105 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 SNORA6-201ENST00000384033 151 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 RNU2-7P-201ENST00000410794 178 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 AC104389.3-201ENST00000445629 235 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 CYP3A52P-201ENST00000563326 91 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 MIR4709-201ENST00000577272 72 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 MIR3126-201ENST00000577443 74 ntBASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 AC008133.2-201ENST00000624540 351 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 326.2 ms