Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Y_RNA.618-201ENST00000410949 107 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 MTND2P23-201ENST00000422990 651 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 MTCYBP9-201ENST00000431021 303 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 AL121914.1-201ENST00000450188 156 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 MIR18B-201ENST00000454574 71 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 snoU13.2-201ENST00000459201 104 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 RNY3P16-201ENST00000516338 101 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 AC020891.4-201ENST00000605745 93 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 MIR376A2-201ENST00000636782 80 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.133-201ENST00000363428 110 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 SNORD27-201ENST00000363981 72 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 SNORA36.2-201ENST00000384004 127 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 MIR573-201ENST00000384964 99 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 SNORD12C-201ENST00000386307 89 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 RNU7-80P-201ENST00000459562 61 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 MIR5197-201ENST00000583721 112 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 AL365205.2-201ENST00000594586 68 ntBASIC0.49□□□□□ -2.33
C9orf40Q8IXQ3 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.65-201ENST00000362846 100 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 RNY4P28-201ENST00000365281 93 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 RNU6-1292P-201ENST00000383856 107 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 MIR568-201ENST00000385036 95 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 RNU6-493P-201ENST00000391321 108 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 RNA5SP261-201ENST00000410536 106 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 RNU7-45P-201ENST00000459460 63 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 snoU13.18-201ENST00000459483 104 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 MIR6717-201ENST00000622747 73 ntBASIC0.48□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.454-201ENST00000384224 113 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.477-201ENST00000384352 108 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 MIR563-201ENST00000385080 79 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 RNU6-578P-201ENST00000390980 103 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 SNORA26.6-201ENST00000391256 115 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 RNU7-56P-201ENST00000458744 62 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 SCARNA15.1-201ENST00000516384 125 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 SNORD116-25-201ENST00000516517 92 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 RNU2-4P-201ENST00000606190 192 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 AC091932.4-201ENST00000623386 200 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 AL596211.1-201ENST00000569873 2277 ntBASIC0.47□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.162-201ENST00000363683 102 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-923P-201ENST00000364753 107 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 MIR1257-201ENST00000408490 117 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 SEPT7P4-201ENST00000437076 306 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 RNU7-185P-201ENST00000459215 60 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 MTND1P19-201ENST00000511780 315 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.797-201ENST00000515977 94 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.668-201ENST00000516233 93 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-1045P-201ENST00000516321 107 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 MIR378D2-201ENST00000580636 98 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 MIR6515-201ENST00000619843 57 ntBASIC0.46□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.20-201ENST00000362479 113 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-978P-201ENST00000364371 103 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.350-201ENST00000365409 98 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-364P-201ENST00000384387 107 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.539-201ENST00000384635 107 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 MIR125B2-201ENST00000385128 89 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 MT-TF-201ENST00000387314 71 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.626-201ENST00000411288 95 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 AL118496.2-201ENST00000448300 230 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 RNU7-70P-201ENST00000516941 66 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 MIR3612-201ENST00000579753 87 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 MIR3152-201ENST00000579801 74 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
C9orf40Q8IXQ3 MIR30D-201ENST00000362283 70 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.121-201ENST00000363309 113 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 RNY1P8-201ENST00000383970 114 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 MIR140-201ENST00000385282 100 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-747P-201ENST00000390928 104 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-241P-201ENST00000391148 104 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 SNORD58.1-201ENST00000391313 66 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 AC062037.2-201ENST00000610137 73 ntBASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
C9orf40Q8IXQ3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 MIR18A-201ENST00000362310 71 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.182-201ENST00000363880 111 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.430-201ENST00000384081 110 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms