Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIR520E-201ENST00000384867 87 ntBASIC0.75□□□□□ -2.29
NUP54Q7Z3B4 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
NUP54Q7Z3B4 RNA5SP261-201ENST00000410536 106 ntBASIC0.75□□□□□ -2.29
NUP54Q7Z3B4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.75□□□□□ -2.29
NUP54Q7Z3B4 Z83818.1-201ENST00000603584 150 ntBASIC0.75□□□□□ -2.29
NUP54Q7Z3B4 MIR342-201ENST00000362212 99 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 MIR411-201ENST00000362239 96 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 Y_RNA.83-201ENST00000363005 113 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 Y_RNA.489-201ENST00000384410 101 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 RNU6-918P-201ENST00000391219 106 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 RNA5SP127-201ENST00000411051 133 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 RPS26P5-201ENST00000418544 335 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 AC009779.6-201ENST00000603972 165 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 AC091932.4-201ENST00000623386 200 ntBASIC0.74□□□□□ -2.29
NUP54Q7Z3B4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 MIR624-201ENST00000385217 97 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 SNORD105-201ENST00000386910 85 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 SNORA26.6-201ENST00000391256 115 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 snoU13.21-201ENST00000459368 105 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 MRPS18CP4-201ENST00000535821 231 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 MIR6740-201ENST00000618268 113 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
NUP54Q7Z3B4 RNU6-369P-201ENST00000362515 102 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 MIR588-201ENST00000384900 83 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 SNORD83.1-201ENST00000411362 77 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 SEPT7P4-201ENST00000437076 306 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 MIR18B-201ENST00000454574 71 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 snoU13.2-201ENST00000459201 104 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 MIR6717-201ENST00000622747 73 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 U6.106-201ENST00000636360 105 ntBASIC0.72□□□□□ -2.29
NUP54Q7Z3B4 RNU6-1020P-201ENST00000363684 107 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 SNORA25.7-201ENST00000364375 127 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 RNU6-1319P-201ENST00000390855 104 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 RNU6-747P-201ENST00000390928 104 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 RNU6-241P-201ENST00000391148 104 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 RNU6-177P-201ENST00000411257 104 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 RNU7-70P-201ENST00000516941 66 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 MIR4431-201ENST00000579990 94 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 AC023934.1-201ENST00000574529 2389 ntBASIC0.71□□□□□ -2.3
NUP54Q7Z3B4 AL596211.1-201ENST00000569873 2277 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.401-201ENST00000383965 117 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 MIR563-201ENST00000385080 79 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 MIR1287-201ENST00000408492 90 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 SCARNA15-202ENST00000516881 127 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 MIR4771-2-201ENST00000577758 74 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 MIR3152-201ENST00000579801 74 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 MIR4771-1-201ENST00000582617 74 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
NUP54Q7Z3B4 RNU6-597P-201ENST00000365620 102 ntBASIC0.69□□□□□ -2.3
NUP54Q7Z3B4 RNU7-45P-201ENST00000459460 63 ntBASIC0.69□□□□□ -2.3
NUP54Q7Z3B4 RNU6-977P-201ENST00000516411 103 ntBASIC0.69□□□□□ -2.3
NUP54Q7Z3B4 CYP3A137P-201ENST00000562436 69 ntBASIC0.69□□□□□ -2.3
NUP54Q7Z3B4 AC130289.1-201ENST00000577321 73 ntBASIC0.69□□□□□ -2.3
NUP54Q7Z3B4 uc_338.6-201ENST00000613544 171 ntBASIC0.69□□□□□ -2.3
NUP54Q7Z3B4 AC010332.2-201ENST00000613083 1904 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.188-201ENST00000363952 111 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 RNU6-312P-201ENST00000364629 107 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 RNU1-133P-201ENST00000364867 167 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 RNU6-47P-201ENST00000383866 107 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 SNORA20-201ENST00000384662 132 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 SNORD12C-201ENST00000386307 89 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 AC015818.7-201ENST00000428754 109 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 AC087499.7-201ENST00000441958 109 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 MIR4804-201ENST00000581683 73 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 MIR4676-201ENST00000583078 72 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
NUP54Q7Z3B4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 MIR520F-201ENST00000384824 87 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 MT-TF-201ENST00000387314 71 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 MT-TG-201ENST00000387429 68 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 AC244098.3-201ENST00000424803 96 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 RNU6-1149P-201ENST00000516810 97 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 RNU6-1271P-201ENST00000517049 105 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 AC020891.4-201ENST00000605745 93 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 AC141273.2-201ENST00000618989 130 ntBASIC0.67□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.233-201ENST00000364407 101 ntBASIC0.66□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.515-201ENST00000384535 112 ntBASIC0.66□□□□□ -2.3
NUP54Q7Z3B4 Y_RNA.521-201ENST00000384560 114 ntBASIC0.66□□□□□ -2.3
NUP54Q7Z3B4 RNA5SP247-201ENST00000411181 105 ntBASIC0.66□□□□□ -2.3
NUP54Q7Z3B4 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms