Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MIR6515-201ENST00000619843 57 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 Y_RNA.168-201ENST00000363740 102 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU6-682P-201ENST00000363843 106 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 Y_RNA.393-201ENST00000383936 102 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 Y_RNA.441-201ENST00000384123 112 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU6-913P-201ENST00000390913 95 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU7-67P-201ENST00000459003 62 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC107027.2-201ENST00000512197 115 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU7-121P-201ENST00000516604 62 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU6-958P-201ENST00000516995 106 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU6-794P-201ENST00000517261 64 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 SNORA81.3-201ENST00000517283 198 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC022559.1-201ENST00000520905 205 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC022709.1-201ENST00000615967 87 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
ZNF544Q6NX49 RNU4-84P-201ENST00000364200 139 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 SNORA25.7-201ENST00000364375 127 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 SNORA26.6-201ENST00000391256 115 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 MIR548I3-201ENST00000408378 149 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 SEPT7P4-201ENST00000437076 306 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 RNU7-80P-201ENST00000459562 61 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 AC036111.3-201ENST00000526389 112 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 MIR4264-201ENST00000583520 66 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 AC131055.1-201ENST00000584626 316 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 AC004792.1-201ENST00000614523 137 ntBASIC0.72□□□□□ -2.29
ZNF544Q6NX49 RNU6-654P-201ENST00000364373 107 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 SNORD113.3-201ENST00000364630 78 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.337-201ENST00000365312 102 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.454-201ENST00000384224 113 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 RNU6-125P-201ENST00000384505 107 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 RNU6-239P-201ENST00000390990 99 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 SNORD111-201ENST00000408139 94 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 RNU6-1135P-201ENST00000411083 103 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 RNU5E-9P-201ENST00000411164 104 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 AC090844.1-201ENST00000422019 156 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 RNU2-11P-201ENST00000459191 187 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 MIR3646-201ENST00000578301 84 ntBASIC0.71□□□□□ -2.3
ZNF544Q6NX49 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.71□□□□□ -2.3
ZNF544Q6NX49 SNORD114-24-201ENST00000365029 72 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.351-201ENST00000365436 96 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.354-201ENST00000365448 111 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.430-201ENST00000384081 110 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 RNU6-768P-201ENST00000384683 107 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
ZNF544Q6NX49 AC244023.1-201ENST00000426884 112 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 AC242498.1-201ENST00000604134 111 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 AC091932.4-201ENST00000623386 200 ntBASIC0.7□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.330-201ENST00000365230 109 ntBASIC0.69□□□□□ -2.3
ZNF544Q6NX49 RNU6-1318P-201ENST00000365389 103 ntBASIC0.69□□□□□ -2.3
ZNF544Q6NX49 SNORA75.5-201ENST00000391291 81 ntBASIC0.69□□□□□ -2.3
ZNF544Q6NX49 RNU6-602P-201ENST00000411155 105 ntBASIC0.69□□□□□ -2.3
ZNF544Q6NX49 RNU2-64P-201ENST00000411315 191 ntBASIC0.69□□□□□ -2.3
ZNF544Q6NX49 RNU6-861P-201ENST00000516745 106 ntBASIC0.69□□□□□ -2.3
ZNF544Q6NX49 AP000753.3-201ENST00000604083 169 ntBASIC0.69□□□□□ -2.3
ZNF544Q6NX49 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 SNORA1.1-201ENST00000364671 133 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.521-201ENST00000384560 114 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 SNORD38B-201ENST00000384690 67 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 MIR613-201ENST00000385248 95 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNU6-1319P-201ENST00000390855 104 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNU6-747P-201ENST00000390928 104 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNU6-241P-201ENST00000391148 104 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNA5SP261-201ENST00000410536 106 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNU6-177P-201ENST00000411257 104 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 FABP5P4-201ENST00000437203 171 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.68□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.662-201ENST00000516028 97 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNA5SP236-201ENST00000516169 116 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNU6-1149P-201ENST00000516810 97 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.68□□□□□ -2.3
ZNF544Q6NX49 FTX_2.1-201ENST00000618816 94 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 MIR6717-201ENST00000622747 73 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 SNORD38B-202ENST00000625943 69 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 MIR6841-201ENST00000637129 72 ntBASIC0.68□□□□□ -2.3
ZNF544Q6NX49 RNU6-1082P-201ENST00000364574 107 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.357-201ENST00000365487 109 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 MIR563-201ENST00000385080 79 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 RNA5SP95-201ENST00000410319 137 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 RNU6-1190P-201ENST00000410811 104 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 HMGN1P33-201ENST00000432945 451 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.67□□□□□ -2.3
ZNF544Q6NX49 RNU6-182P-201ENST00000516970 105 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms