Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MIR588-201ENST00000384900 83 ntBASIC0.7□□□□□ -2.3
CDH13P55290 RNU1-119P-201ENST00000391122 165 ntBASIC0.7□□□□□ -2.3
CDH13P55290 SNORD83.1-201ENST00000411362 77 ntBASIC0.7□□□□□ -2.3
CDH13P55290 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
CDH13P55290 COX6CP6-201ENST00000490840 228 ntBASIC0.7□□□□□ -2.3
CDH13P55290 MIR4771-2-201ENST00000577758 74 ntBASIC0.7□□□□□ -2.3
CDH13P55290 MIR4771-1-201ENST00000582617 74 ntBASIC0.7□□□□□ -2.3
CDH13P55290 MIR3149-201ENST00000584629 83 ntBASIC0.7□□□□□ -2.3
CDH13P55290 AL353621.2-201ENST00000605340 133 ntBASIC0.7□□□□□ -2.3
CDH13P55290 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.7□□□□□ -2.3
CDH13P55290 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
CDH13P55290 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
CDH13P55290 MIR342-201ENST00000362212 99 ntBASIC0.69□□□□□ -2.3
CDH13P55290 Y_RNA.60-201ENST00000362831 98 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-463P-201ENST00000384340 107 ntBASIC0.69□□□□□ -2.3
CDH13P55290 MIR563-201ENST00000385080 79 ntBASIC0.69□□□□□ -2.3
CDH13P55290 MIR624-201ENST00000385217 97 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-1319P-201ENST00000390855 104 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-747P-201ENST00000390928 104 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-241P-201ENST00000391148 104 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-1165P-201ENST00000410119 107 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-1190P-201ENST00000410811 104 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNA5SP127-201ENST00000411051 133 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-177P-201ENST00000411257 104 ntBASIC0.69□□□□□ -2.3
CDH13P55290 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
CDH13P55290 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-977P-201ENST00000516411 103 ntBASIC0.69□□□□□ -2.3
CDH13P55290 Y_RNA.680-201ENST00000516441 93 ntBASIC0.69□□□□□ -2.3
CDH13P55290 RNU6-111P-201ENST00000517179 105 ntBASIC0.69□□□□□ -2.3
CDH13P55290 AC004817.2-201ENST00000561794 651 ntBASIC0.69□□□□□ -2.3
CDH13P55290 MIR3152-201ENST00000579801 74 ntBASIC0.69□□□□□ -2.3
CDH13P55290 AC091932.4-201ENST00000623386 200 ntBASIC0.69□□□□□ -2.3
CDH13P55290 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CDH13P55290 Y_RNA.75-201ENST00000362927 97 ntBASIC0.68□□□□□ -2.3
CDH13P55290 Y_RNA.182-201ENST00000363880 111 ntBASIC0.68□□□□□ -2.3
CDH13P55290 MT-TF-201ENST00000387314 71 ntBASIC0.68□□□□□ -2.3
CDH13P55290 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
CDH13P55290 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
CDH13P55290 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.68□□□□□ -2.3
CDH13P55290 MIR4804-201ENST00000581683 73 ntBASIC0.68□□□□□ -2.3
CDH13P55290 Y_RNA.226-201ENST00000364337 114 ntBASIC0.67□□□□□ -2.3
CDH13P55290 Y_RNA.307-201ENST00000365022 117 ntBASIC0.67□□□□□ -2.3
CDH13P55290 MIR520F-201ENST00000384824 87 ntBASIC0.67□□□□□ -2.3
CDH13P55290 AL078595.1-201ENST00000404458 226 ntBASIC0.67□□□□□ -2.3
CDH13P55290 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
CDH13P55290 MRPS18CP4-201ENST00000535821 231 ntBASIC0.67□□□□□ -2.3
CDH13P55290 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
CDH13P55290 MIR4676-201ENST00000583078 72 ntBASIC0.67□□□□□ -2.3
CDH13P55290 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
CDH13P55290 Y_RNA.224-201ENST00000364308 111 ntBASIC0.66□□□□□ -2.3
CDH13P55290 MIR573-201ENST00000384964 99 ntBASIC0.66□□□□□ -2.3
CDH13P55290 MIR1287-201ENST00000408492 90 ntBASIC0.66□□□□□ -2.3
CDH13P55290 SEPT7P4-201ENST00000437076 306 ntBASIC0.66□□□□□ -2.3
CDH13P55290 RPS29P1-201ENST00000465274 159 ntBASIC0.66□□□□□ -2.3
CDH13P55290 RNU7-70P-201ENST00000516941 66 ntBASIC0.66□□□□□ -2.3
CDH13P55290 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.66□□□□□ -2.3
CDH13P55290 Z83818.1-201ENST00000603584 150 ntBASIC0.66□□□□□ -2.3
CDH13P55290 AL162730.1-201ENST00000605734 292 ntBASIC0.66□□□□□ -2.3
CDH13P55290 AC020891.4-201ENST00000605745 93 ntBASIC0.66□□□□□ -2.3
CDH13P55290 uc_338.6-201ENST00000613544 171 ntBASIC0.66□□□□□ -2.3
CDH13P55290 AL596211.1-201ENST00000569873 2277 ntBASIC0.65□□□□□ -2.31
CDH13P55290 Y_RNA.144-201ENST00000363521 113 ntBASIC0.65□□□□□ -2.31
CDH13P55290 Y_RNA.200-201ENST00000364018 102 ntBASIC0.65□□□□□ -2.31
CDH13P55290 SNORA25.7-201ENST00000364375 127 ntBASIC0.65□□□□□ -2.31
CDH13P55290 RNU4-45P-201ENST00000365469 141 ntBASIC0.65□□□□□ -2.31
CDH13P55290 RNU6-597P-201ENST00000365620 102 ntBASIC0.65□□□□□ -2.31
CDH13P55290 MIR520H-201ENST00000385126 88 ntBASIC0.65□□□□□ -2.31
CDH13P55290 SNORD12C-201ENST00000386307 89 ntBASIC0.65□□□□□ -2.31
CDH13P55290 RNU6-918P-201ENST00000391219 106 ntBASIC0.65□□□□□ -2.31
CDH13P55290 RNU7-56P-201ENST00000458744 62 ntBASIC0.65□□□□□ -2.31
CDH13P55290 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
CDH13P55290 AL078603.1-201ENST00000603824 313 ntBASIC0.65□□□□□ -2.31
CDH13P55290 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
CDH13P55290 AC023934.1-201ENST00000574529 2389 ntBASIC0.65□□□□□ -2.31
CDH13P55290 MIR411-201ENST00000362239 96 ntBASIC0.64□□□□□ -2.31
CDH13P55290 MIR30D-201ENST00000362283 70 ntBASIC0.64□□□□□ -2.31
CDH13P55290 Y_RNA.83-201ENST00000363005 113 ntBASIC0.64□□□□□ -2.31
CDH13P55290 RNU1-133P-201ENST00000364867 167 ntBASIC0.64□□□□□ -2.31
CDH13P55290 Y_RNA.412-201ENST00000384001 104 ntBASIC0.64□□□□□ -2.31
CDH13P55290 SNORA20-201ENST00000384662 132 ntBASIC0.64□□□□□ -2.31
CDH13P55290 MIR938-201ENST00000401216 83 ntBASIC0.64□□□□□ -2.31
CDH13P55290 RNA5SP247-201ENST00000411181 105 ntBASIC0.64□□□□□ -2.31
CDH13P55290 SCARNA15-202ENST00000516881 127 ntBASIC0.64□□□□□ -2.31
CDH13P55290 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
CDH13P55290 MIR4431-201ENST00000579990 94 ntBASIC0.64□□□□□ -2.31
CDH13P55290 AC009779.6-201ENST00000603972 165 ntBASIC0.64□□□□□ -2.31
CDH13P55290 Y_RNA.489-201ENST00000384410 101 ntBASIC0.63□□□□□ -2.31
CDH13P55290 MIR125B2-201ENST00000385128 89 ntBASIC0.63□□□□□ -2.31
CDH13P55290 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
CDH13P55290 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
CDH13P55290 RNU7-185P-201ENST00000459215 60 ntBASIC0.63□□□□□ -2.31
CDH13P55290 RNU7-45P-201ENST00000459460 63 ntBASIC0.63□□□□□ -2.31
CDH13P55290 MIR6788-201ENST00000618842 66 ntBASIC0.63□□□□□ -2.31
CDH13P55290 AC021613.1-201ENST00000623880 111 ntBASIC0.63□□□□□ -2.31
CDH13P55290 U6.106-201ENST00000636360 105 ntBASIC0.63□□□□□ -2.31
CDH13P55290 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CDH13P55290 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
CDH13P55290 Y_RNA.515-201ENST00000384535 112 ntBASIC0.62□□□□□ -2.31
CDH13P55290 MIR1257-201ENST00000408490 117 ntBASIC0.62□□□□□ -2.31
CDH13P55290 AC015818.7-201ENST00000428754 109 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms